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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7051 O_BomoMSG16347_internal:A_BomoMSG_c25466_g1_i3
140bp
 hillarin_[Bombyx_mori]
7052 O_BomoMSG16348_internal:A_BomoMSG_c25466_g1_i4
315bp
 hillarin_[Bombyx_mori]
GO:0001891 C phagocytic cup
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006935 P chemotaxis
GO:0006970 P response to osmotic stress
GO:0007015 P actin filament organization
GO:0008270 F zinc ion binding
GO:0030010 P establishment of cell polarity
GO:0030866 P cortical actin cytoskeleton organization
GO:0031143 C pseudopodium
GO:0031941 C filamentous actin
GO:0042995 C cell projection
GO:0043327 P chemotaxis to cAMP
GO:0044354 C macropinosome
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
7053 O_BomoMSG16349_5prime_partial:A_BomoMSG_c25466_g1_i4
154bp
7054 O_BomoMSG1634_complete:A_BomoMSG_c7849_g1_i1
131bp
7055 O_BomoMSG16350_internal:A_BomoMSG_c25468_g1_i1
804bp
 uncharacterized_protein_LOC101743995_[Bombyx_mori]
7056 O_BomoMSG16351_internal:A_BomoMSG_c25468_g2_i1
271bp
 uncharacterized_protein_LOC101743995_[Bombyx_mori]
7057 O_BomoMSG16352_internal:A_BomoMSG_c25468_g1_i2
263bp
 uncharacterized_protein_LOC101743995_[Bombyx_mori]
7058 O_BomoMSG16353_3prime_partial:A_BomoMSG_c25469_g1_i1
147bp
 translation_initiation_factor_1a_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005575 C cellular_component
GO:0006413 P translational initiation
GO:0008150 P biological_process
7059 O_BomoMSG16354_complete:A_BomoMSG_c25470_g2_i1
421bp
 cystinosin_homolog_isoform_X3_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7060 O_BomoMSG16355_complete:A_BomoMSG_c25470_g2_i1
100bp
7061 O_BomoMSG16356_complete:A_BomoMSG_c25470_g2_i2
397bp
 cystinosin_homolog_isoform_X4_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7062 O_BomoMSG16357_complete:A_BomoMSG_c25470_g2_i2
100bp
7063 O_BomoMSG16358_complete:A_BomoMSG_c25470_g2_i3
397bp
 cystinosin_homolog_isoform_X4_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7064 O_BomoMSG16359_complete:A_BomoMSG_c25470_g2_i3
100bp
7065 O_BomoMSG1635_internal:A_BomoMSG_c7849_g1_i2
419bp
 fragile_X_mental_retardation_syndrome-related_protein_1_homolog_A-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0033592 F RNA strand annealing activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:2000637 P positive regulation of gene silencing by miRNA
7066 O_BomoMSG16360_5prime_partial:A_BomoMSG_c25470_g2_i4
236bp
 cystinosin_homolog_isoform_X4_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015184 F L-cystine transmembrane transporter activity
GO:0015811 P L-cystine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7067 O_BomoMSG16361_internal:A_BomoMSG_c25471_g1_i1
135bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
7068 O_BomoMSG16362_internal:A_BomoMSG_c25471_g2_i1
260bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
7069 O_BomoMSG16363_5prime_partial:A_BomoMSG_c25471_g2_i1
148bp
7070 O_BomoMSG16364_complete:A_BomoMSG_c25471_g2_i1
102bp
7071 O_BomoMSG16365_5prime_partial:A_BomoMSG_c25471_g2_i2
206bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
7072 O_BomoMSG16366_5prime_partial:A_BomoMSG_c25471_g2_i2
123bp
7073 O_BomoMSG16367_complete:A_BomoMSG_c25471_g2_i2
102bp
7074 O_BomoMSG16368_internal:A_BomoMSG_c25471_g1_i2
139bp
 la-related_protein_7_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
7075 O_BomoMSG16369_3prime_partial:A_BomoMSG_c25472_g1_i1
349bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005923 C bicellular tight junction
GO:0030674 F protein-macromolecule adaptor activity
GO:0090162 P establishment of epithelial cell polarity
7076 O_BomoMSG1636_5prime_partial:A_BomoMSG_c7849_g1_i2
194bp
7077 O_BomoMSG16370_internal:A_BomoMSG_c25472_g1_i2
215bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
7078 O_BomoMSG16371_internal:A_BomoMSG_c25472_g1_i3
298bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
7079 O_BomoMSG16372_complete:A_BomoMSG_c25474_g1_i1
422bp
 PREDICTED:_ski_oncogene_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0046332 F SMAD binding
7080 O_BomoMSG16373_complete:A_BomoMSG_c25474_g1_i1
150bp
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