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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7021 O_BomoMSG1631_internal:A_BomoMSG_c7843_g1_i1
103bp
 required_for_meiotic_nuclear_division_protein_1_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0070131 P positive regulation of mitochondrial translation
7022 O_BomoMSG16320_complete:A_BomoMSG_c25461_g1_i2
119bp
7023 O_BomoMSG16321_complete:A_BomoMSG_c25461_g1_i2
110bp
7024 O_BomoMSG16322_5prime_partial:A_BomoMSG_c25461_g1_i3
609bp
 syntaxin-binding_protein_5_isoform_X4_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0017157 P regulation of exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
7025 O_BomoMSG16323_complete:A_BomoMSG_c25461_g1_i3
119bp
7026 O_BomoMSG16324_complete:A_BomoMSG_c25461_g1_i3
110bp
7027 O_BomoMSG16325_complete:A_BomoMSG_c25462_g1_i1
542bp
 mucin-5AC-like_[Bombyx_mori]
7028 O_BomoMSG16326_complete:A_BomoMSG_c25462_g1_i1
158bp
7029 O_BomoMSG16327_complete:A_BomoMSG_c25462_g1_i2
542bp
 mucin-5AC-like_[Bombyx_mori]
7030 O_BomoMSG16328_complete:A_BomoMSG_c25462_g1_i2
158bp
7031 O_BomoMSG16329_complete:A_BomoMSG_c25462_g1_i4
154bp
 putative_integrase_core_domain_protein,_partial_[Operophtera_brumata]
7032 O_BomoMSG1632_internal:A_BomoMSG_c7849_g1_i1
413bp
 fragile_X_mental_retardation_syndrome-related_protein_1_homolog_A-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0033592 F RNA strand annealing activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:2000637 P positive regulation of gene silencing by miRNA
7033 O_BomoMSG16330_complete:A_BomoMSG_c25462_g1_i5
542bp
 mucin-5AC-like_[Bombyx_mori]
7034 O_BomoMSG16331_complete:A_BomoMSG_c25462_g1_i5
158bp
7035 O_BomoMSG16332_complete:A_BomoMSG_c25462_g1_i6
114bp
 RNA_polymerase_II_transcriptional_coactivator_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045892 P negative regulation of transcription, DNA-templated
7036 O_BomoMSG16333_5prime_partial:A_BomoMSG_c25463_g1_i1
132bp
7037 O_BomoMSG16334_3prime_partial:A_BomoMSG_c25463_g1_i1
118bp
 dual_specificity_testis-specific_protein_kinase_2,_partial_[Bombyx_mori]
7038 O_BomoMSG16335_5prime_partial:A_BomoMSG_c25463_g1_i2
132bp
7039 O_BomoMSG16336_3prime_partial:A_BomoMSG_c25463_g1_i2
118bp
 dual_specificity_testis-specific_protein_kinase_2,_partial_[Bombyx_mori]
7040 O_BomoMSG16337_5prime_partial:A_BomoMSG_c25463_g1_i3
132bp
7041 O_BomoMSG16338_3prime_partial:A_BomoMSG_c25463_g1_i3
118bp
 dual_specificity_testis-specific_protein_kinase_2,_partial_[Bombyx_mori]
7042 O_BomoMSG16339_5prime_partial:A_BomoMSG_c25464_g1_i1
467bp
 zinc_finger_protein_1_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7043 O_BomoMSG1633_5prime_partial:A_BomoMSG_c7849_g1_i1
194bp
7044 O_BomoMSG16340_5prime_partial:A_BomoMSG_c25464_g1_i1
115bp
7045 O_BomoMSG16341_complete:A_BomoMSG_c25464_g1_i2
464bp
 zinc_finger_protein_1_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7046 O_BomoMSG16342_5prime_partial:A_BomoMSG_c25464_g1_i2
115bp
7047 O_BomoMSG16343_5prime_partial:A_BomoMSG_c25464_g1_i3
115bp
7048 O_BomoMSG16344_3prime_partial:A_BomoMSG_c25466_g1_i2
325bp
 hillarin_[Bombyx_mori]
GO:0001891 C phagocytic cup
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006935 P chemotaxis
GO:0006970 P response to osmotic stress
GO:0007015 P actin filament organization
GO:0008270 F zinc ion binding
GO:0030010 P establishment of cell polarity
GO:0030866 P cortical actin cytoskeleton organization
GO:0031143 C pseudopodium
GO:0031941 C filamentous actin
GO:0042995 C cell projection
GO:0043327 P chemotaxis to cAMP
GO:0044354 C macropinosome
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
7049 O_BomoMSG16345_5prime_partial:A_BomoMSG_c25466_g1_i2
154bp
7050 O_BomoMSG16346_internal:A_BomoMSG_c25466_g1_i3
141bp
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