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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6991 O_BomoMSG16293_internal:A_BomoMSG_c25450_g1_i4
727bp
 target_of_rapamycin_isoform_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003007 P heart morphogenesis
GO:0003179 P heart valve morphogenesis
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005942 C phosphatidylinositol 3-kinase complex
GO:0005979 P regulation of glycogen biosynthetic process
GO:0006109 P regulation of carbohydrate metabolic process
GO:0006112 P energy reserve metabolic process
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006950 P response to stress
GO:0007050 P regulation of cell cycle
GO:0007165 P signal transduction
GO:0007281 P germ cell development
GO:0007420 P brain development
GO:0007569 P cell aging
GO:0007584 P response to nutrient
GO:0007616 P long-term memory
GO:0008144 F obsolete drug binding
GO:0008542 P visual learning
GO:0009791 P post-embryonic development
GO:0010507 P negative regulation of autophagy
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010628 P positive regulation of gene expression
GO:0010831 P positive regulation of myotube differentiation
GO:0010942 P positive regulation of cell death
GO:0010976 P positive regulation of neuron projection development
GO:0012505 C endomembrane system
GO:0014042 P positive regulation of neuron maturation
GO:0014736 P negative regulation of muscle atrophy
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0021510 P spinal cord development
GO:0030030 P cell projection organization
GO:0030163 P protein catabolic process
GO:0030425 C dendrite
GO:0030838 P positive regulation of actin filament polymerization
GO:0031090 C organelle membrane
GO:0031295 P T cell costimulation
GO:0031397 P negative regulation of protein ubiquitination
GO:0031529 P ruffle organization
GO:0031641 P regulation of myelination
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0032095 P regulation of response to food
GO:0032868 P response to insulin
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032991 C protein-containing complex
GO:0035176 P social behavior
GO:0035264 P multicellular organism growth
GO:0040007 P growth
GO:0042060 P wound healing
GO:0042220 P response to cocaine
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043200 P response to amino acid
GO:0043231 C intracellular membrane-bounded organelle
GO:0043278 P response to morphine
GO:0043610 P regulation of carbohydrate utilization
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045670 P regulation of osteoclast differentiation
GO:0045727 P positive regulation of translation
GO:0045792 P negative regulation of cell size
GO:0045859 P regulation of protein kinase activity
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0046777 P protein autophosphorylation
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048255 P mRNA stabilization
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0048738 P cardiac muscle tissue development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050769 P positive regulation of neurogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051219 F phosphoprotein binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:0055006 P cardiac cell development
GO:0055013 P cardiac muscle cell development
GO:0060048 P cardiac muscle contraction
GO:0060135 P maternal process involved in female pregnancy
GO:0060252 P positive regulation of glial cell proliferation
GO:0060999 P positive regulation of dendritic spine development
GO:0061051 P positive regulation of cell growth involved in cardiac muscle cell development
GO:0071456 P cellular response to hypoxia
GO:0090335 P regulation of brown fat cell differentiation
GO:0090559 P regulation of membrane permeability
GO:1900034 P regulation of cellular response to heat
GO:1901216 P positive regulation of neuron death
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
GO:1904000 P positive regulation of eating behavior
GO:1904056 P positive regulation of cholangiocyte proliferation
GO:1904058 P positive regulation of sensory perception of pain
GO:1904193 P negative regulation of cholangiocyte apoptotic process
GO:1904197 P positive regulation of granulosa cell proliferation
GO:1904206 P positive regulation of skeletal muscle hypertrophy
GO:1904213 P negative regulation of iodide transmembrane transport
6992 O_BomoMSG16294_complete:A_BomoMSG_c25451_g3_i1
363bp
 proteasome_26S_non-ATPase_subunit_4_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
6993 O_BomoMSG16295_complete:A_BomoMSG_c25452_g1_i1
506bp
 60S_ribosomal_export_protein_NMD3_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0043023 F ribosomal large subunit binding
GO:0044822 F RNA binding
6994 O_BomoMSG16296_complete:A_BomoMSG_c25452_g1_i1
103bp
6995 O_BomoMSG16297_5prime_partial:A_BomoMSG_c25452_g1_i2
316bp
 60S_ribosomal_export_protein_NMD3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
6996 O_BomoMSG16298_complete:A_BomoMSG_c25452_g1_i2
103bp
6997 O_BomoMSG16299_5prime_partial:A_BomoMSG_c25452_g1_i3
472bp
 60S_ribosomal_export_protein_NMD3_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0043023 F ribosomal large subunit binding
GO:0044822 F RNA binding
6998 O_BomoMSG1629_internal:A_BomoMSG_c7841_g1_i1
185bp
 ubiquitin_carboxyl-terminal_hydrolase_35_isoform_X2_[Bombyx_mori]
6999 O_BomoMSG162_3prime_partial:A_BomoMSG_c646_g1_i1
142bp
 BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
7000 O_BomoMSG16300_complete:A_BomoMSG_c25452_g1_i3
103bp
7001 O_BomoMSG16301_internal:A_BomoMSG_c25453_g1_i1
239bp
 antitrypsin_isoform_3_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
7002 O_BomoMSG16302_5prime_partial:A_BomoMSG_c25453_g2_i1
165bp
 antitrypsin_isoform_3_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
7003 O_BomoMSG16303_internal:A_BomoMSG_c25453_g2_i2
137bp
 antitrypsin_isoform_X1_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
7004 O_BomoMSG16304_5prime_partial:A_BomoMSG_c25454_g1_i1
299bp
 uncharacterized_protein_LOC101740927_[Bombyx_mori]
7005 O_BomoMSG16305_5prime_partial:A_BomoMSG_c25454_g1_i2
313bp
 uncharacterized_protein_LOC101740927_[Bombyx_mori]
7006 O_BomoMSG16306_complete:A_BomoMSG_c25455_g1_i1
223bp
 repressor_of_RNA_polymerase_III_transcription_MAF1_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016480 P negative regulation of transcription by RNA polymerase III
7007 O_BomoMSG16307_complete:A_BomoMSG_c25455_g1_i1
130bp
7008 O_BomoMSG16308_complete:A_BomoMSG_c25456_g1_i1
252bp
 mediator_of_RNA_polymerase_II_transcription_subunit_4_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
7009 O_BomoMSG16309_complete:A_BomoMSG_c25456_g1_i2
180bp
 mediator_of_RNA_polymerase_II_transcription_subunit_4_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
7010 O_BomoMSG1630_5prime_partial:A_BomoMSG_c7841_g1_i1
106bp
7011 O_BomoMSG16310_complete:A_BomoMSG_c25458_g1_i1
212bp
 ceramide-1-phosphate_transfer_protein_[Bombyx_mori]
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005634 C nucleus
GO:0005640 C nuclear outer membrane
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
GO:1902387 F ceramide 1-phosphate binding
GO:1902388 F ceramide 1-phosphate transfer activity
GO:1902389 P ceramide 1-phosphate transport
7012 O_BomoMSG16311_3prime_partial:A_BomoMSG_c25459_g1_i1
612bp
 non-lysosomal_glucosylceramidase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7013 O_BomoMSG16312_internal:A_BomoMSG_c25459_g1_i2
330bp
 non-lysosomal_glucosylceramidase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7014 O_BomoMSG16313_internal:A_BomoMSG_c25459_g1_i3
304bp
 non-lysosomal_glucosylceramidase_isoform_X3_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004348 F glucosylceramidase activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008206 P bile acid metabolic process
GO:0008422 F beta-glucosidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016139 P glycoside catabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
7015 O_BomoMSG16314_5prime_partial:A_BomoMSG_c25460_g1_i1
404bp
 multidrug_resistance_protein_homolog_49_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
7016 O_BomoMSG16315_5prime_partial:A_BomoMSG_c25460_g1_i2
375bp
 multidrug_resistance_protein_homolog_49_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
7017 O_BomoMSG16316_5prime_partial:A_BomoMSG_c25461_g1_i1
634bp
 syntaxin-binding_protein_5_isoform_X4_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0017157 P regulation of exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
7018 O_BomoMSG16317_complete:A_BomoMSG_c25461_g1_i1
119bp
7019 O_BomoMSG16318_complete:A_BomoMSG_c25461_g1_i1
110bp
7020 O_BomoMSG16319_5prime_partial:A_BomoMSG_c25461_g1_i2
586bp
 syntaxin-binding_protein_5_isoform_X4_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0010468 P regulation of gene expression
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017075 F syntaxin-1 binding
GO:0017137 F small GTPase binding
GO:0017157 P regulation of exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030141 C secretory granule
GO:0030193 P regulation of blood coagulation
GO:0030659 C cytoplasmic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045921 P positive regulation of exocytosis
GO:0050708 P regulation of protein secretion
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