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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6901 O_BomoMSG16211_complete:A_BomoMSG_c25431_g1_i1
125bp
6902 O_BomoMSG16212_internal:A_BomoMSG_c25432_g1_i2
397bp
 H3K9_methyltransferase-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006333 P chromatin assembly or disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0036123 P histone H3-K9 dimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0042754 P negative regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048511 P rhythmic process
GO:0071456 P cellular response to hypoxia
6903 O_BomoMSG16213_internal:A_BomoMSG_c25433_g1_i1
343bp
 nuclear_pore_glycoprotein_p62_[Bombyx_mori]
6904 O_BomoMSG16214_5prime_partial:A_BomoMSG_c25433_g1_i1
116bp
6905 O_BomoMSG16215_internal:A_BomoMSG_c25433_g1_i2
161bp
 nuclear_pore_glycoprotein_p62_[Bombyx_mori]
6906 O_BomoMSG16216_5prime_partial:A_BomoMSG_c25433_g3_i1
325bp
 nuclear_pore_glycoprotein_p62_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0003682 F chromatin binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005642 C annulate lamellae
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007569 P cell aging
GO:0008219 P cell death
GO:0008285 P negative regulation of cell population proliferation
GO:0009755 P hormone-mediated signaling pathway
GO:0009966 P regulation of signal transduction
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030529 C ribonucleoprotein complex
GO:0030544 F Hsp70 protein binding
GO:0031047 P gene silencing by RNA
GO:0031074 C nucleocytoplasmic transport complex
GO:0031965 C nuclear membrane
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042169 F SH2 domain binding
GO:0042306 P regulation of protein import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043069 P negative regulation of programmed cell death
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0044613 C nuclear pore central transport channel
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046578 P regulation of Ras protein signal transduction
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046930 C pore complex
GO:0046966 F thyroid hormone receptor binding
GO:0051028 P mRNA transport
GO:0051169 P nuclear transport
GO:0051425 F PTB domain binding
GO:0051879 F Hsp90 protein binding
GO:0070208 P protein heterotrimerization
GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
GO:0075733 P intracellular transport of virus
GO:0090543 C Flemming body
GO:1900034 P regulation of cellular response to heat
6907 O_BomoMSG16217_3prime_partial:A_BomoMSG_c25433_g1_i3
417bp
 nuclear_pore_glycoprotein_p62_[Bombyx_mori]
6908 O_BomoMSG16218_complete:A_BomoMSG_c25433_g1_i3
121bp
6909 O_BomoMSG16219_complete:A_BomoMSG_c25434_g3_i1
137bp
 uncharacterized_protein_LOC101745002_[Bombyx_mori]
6910 O_BomoMSG1621_internal:A_BomoMSG_c7823_g1_i1
156bp
 disks_large_homolog_5_isoform_X1_[Bombyx_mori]
6911 O_BomoMSG16220_complete:A_BomoMSG_c25434_g5_i1
469bp
 juvenile_hormone_epoxide_hydrolase-like_protein_2_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0033961 F cis-stilbene-oxide hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
6912 O_BomoMSG16221_complete:A_BomoMSG_c25434_g12_i1
284bp
 alpha-tocopherol_transfer_protein-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
6913 O_BomoMSG16222_complete:A_BomoMSG_c25435_g1_i2
321bp
 RGS-GAIP_interacting_protein_GIPC_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0006605 P protein targeting
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0012506 C vesicle membrane
GO:0014047 P glutamate secretion
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017022 F myosin binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032467 P positive regulation of cytokinesis
GO:0042803 F protein homodimerization activity
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0043542 P endothelial cell migration
GO:0048167 P regulation of synaptic plasticity
GO:0070062 C extracellular exosome
6914 O_BomoMSG16223_complete:A_BomoMSG_c25435_g1_i3
321bp
 RGS-GAIP_interacting_protein_GIPC_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0006605 P protein targeting
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0012506 C vesicle membrane
GO:0014047 P glutamate secretion
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017022 F myosin binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032467 P positive regulation of cytokinesis
GO:0042803 F protein homodimerization activity
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0043542 P endothelial cell migration
GO:0048167 P regulation of synaptic plasticity
GO:0070062 C extracellular exosome
6915 O_BomoMSG16224_5prime_partial:A_BomoMSG_c25435_g1_i4
136bp
 RGS-GAIP_interacting_protein_GIPC_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0006605 P protein targeting
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0012506 C vesicle membrane
GO:0014047 P glutamate secretion
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017022 F myosin binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032467 P positive regulation of cytokinesis
GO:0042803 F protein homodimerization activity
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0043542 P endothelial cell migration
GO:0048167 P regulation of synaptic plasticity
GO:0070062 C extracellular exosome
6916 O_BomoMSG16225_3prime_partial:A_BomoMSG_c25436_g1_i1
650bp
 calpain-A_isoform_X5_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
6917 O_BomoMSG16226_complete:A_BomoMSG_c25436_g1_i1
103bp
6918 O_BomoMSG16227_5prime_partial:A_BomoMSG_c25436_g1_i1
102bp
6919 O_BomoMSG16228_3prime_partial:A_BomoMSG_c25436_g1_i2
650bp
 calpain-A_isoform_X5_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
6920 O_BomoMSG16229_complete:A_BomoMSG_c25436_g1_i2
103bp
6921 O_BomoMSG1622_internal:A_BomoMSG_c7829_g1_i1
137bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
6922 O_BomoMSG16230_5prime_partial:A_BomoMSG_c25436_g1_i2
102bp
6923 O_BomoMSG16231_3prime_partial:A_BomoMSG_c25436_g1_i3
650bp
 calpain-A_isoform_X5_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
6924 O_BomoMSG16232_complete:A_BomoMSG_c25436_g1_i3
103bp
6925 O_BomoMSG16233_5prime_partial:A_BomoMSG_c25436_g1_i3
102bp
6926 O_BomoMSG16234_complete:A_BomoMSG_c25437_g1_i1
149bp
 nuclear_nucleic_acid-binding_protein_C1D-like_[Bombyx_mori]
GO:0000178 C exosome (RNase complex)
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
6927 O_BomoMSG16235_5prime_partial:A_BomoMSG_c25438_g1_i2
109bp
6928 O_BomoMSG16236_5prime_partial:A_BomoMSG_c25438_g1_i3
545bp
 LMBR1_domain-containing_protein_2_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6929 O_BomoMSG16237_5prime_partial:A_BomoMSG_c25438_g1_i3
113bp
6930 O_BomoMSG16238_complete:A_BomoMSG_c25438_g1_i3
103bp
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