Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
6931	O_BomoMSG16239_complete:A_BomoMSG_c25438_g1_i4 685bp	Bomo_Chr22	LMBR1_domain-containing_protein_2_homolog_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
6932	O_BomoMSG1623_5prime_partial:A_BomoMSG_c7829_g1_i1 111bp	Bomo_Chr15
6933	O_BomoMSG16240_5prime_partial:A_BomoMSG_c25438_g1_i4 113bp	Bomo_Chr22
6934	O_BomoMSG16241_complete:A_BomoMSG_c25438_g1_i4 103bp	Bomo_Chr22
6935	O_BomoMSG16242_5prime_partial:A_BomoMSG_c25439_g1_i1 141bp	Bomo_Chr24	zinc_finger_protein_Xfin_[Bombyx_mori]	GO:0001223 F transcription coactivator binding GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007049 P cell cycle GO:0007050 P regulation of cell cycle GO:0008134 F transcription factor binding GO:0008285 P negative regulation of cell population proliferation GO:0043565 F sequence-specific DNA binding GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding
6936	O_BomoMSG16243_5prime_partial:A_BomoMSG_c25439_g1_i2 532bp	Bomo_Chr24	zinc_finger_protein_Xfin_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding
6937	O_BomoMSG16244_complete:A_BomoMSG_c25439_g1_i2 211bp	Bomo_Chr24
6938	O_BomoMSG16245_5prime_partial:A_BomoMSG_c25439_g3_i1 125bp	Bomo_Chr11
6939	O_BomoMSG16246_3prime_partial:A_BomoMSG_c25440_g1_i1 597bp	Bomo_Chr19	NF-kappa-B_essential_modulator_isoform_X1_[Bombyx_mori]	GO:0000042 P protein localization to Golgi apparatus GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006914 P autophagy GO:0007409 P axonogenesis GO:0016023 C cytoplasmic vesicle GO:0016192 P vesicle-mediated transport GO:0031410 C cytoplasmic vesicle GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling GO:0043130 F ubiquitin binding GO:0051648 P vesicle localization GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding GO:0090161 P Golgi ribbon formation
6940	O_BomoMSG16247_complete:A_BomoMSG_c25440_g1_i1 108bp	Bomo_Chr19
6941	O_BomoMSG16248_complete:A_BomoMSG_c25440_g1_i1 105bp	Bomo_Chr19
6942	O_BomoMSG16249_internal:A_BomoMSG_c25440_g1_i3 457bp	Bomo_Chr19	optineurin_isoform_X3_[Bombyx_mori]	GO:0000042 P protein localization to Golgi apparatus GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006914 P autophagy GO:0007409 P axonogenesis GO:0016023 C cytoplasmic vesicle GO:0016192 P vesicle-mediated transport GO:0031410 C cytoplasmic vesicle GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling GO:0043130 F ubiquitin binding GO:0051648 P vesicle localization GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding GO:0090161 P Golgi ribbon formation
6943	O_BomoMSG1624_5prime_partial:A_BomoMSG_c7829_g1_i1 101bp	Bomo_Chr15
6944	O_BomoMSG16250_complete:A_BomoMSG_c25440_g1_i3 108bp	Bomo_Chr19
6945	O_BomoMSG16251_complete:A_BomoMSG_c25440_g1_i3 105bp	Bomo_Chr19
6946	O_BomoMSG16252_internal:A_BomoMSG_c25440_g1_i4 436bp	Bomo_Chr19	NF-kappa-B_essential_modulator_isoform_X1_[Bombyx_mori]	GO:0000042 P protein localization to Golgi apparatus GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0006914 P autophagy GO:0007409 P axonogenesis GO:0016023 C cytoplasmic vesicle GO:0016192 P vesicle-mediated transport GO:0031410 C cytoplasmic vesicle GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling GO:0043130 F ubiquitin binding GO:0051648 P vesicle localization GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding GO:0090161 P Golgi ribbon formation
6947	O_BomoMSG16253_complete:A_BomoMSG_c25440_g1_i4 108bp	Bomo_Chr19
6948	O_BomoMSG16254_complete:A_BomoMSG_c25440_g1_i4 105bp	Bomo_Chr19
6949	O_BomoMSG16255_5prime_partial:A_BomoMSG_c25442_g1_i1 199bp	Bomo_Chr11	solute_carrier_family_35_member_B3_isoform_1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0007275 P multicellular organism development GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030173 C integral component of Golgi membrane GO:0030176 C integral component of endoplasmic reticulum membrane GO:0046963 P 3'-phosphoadenosine 5'-phosphosulfate transport GO:0046964 F 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity GO:0055085 P transmembrane transport GO:1902559 P 3'-phospho-5'-adenylyl sulfate transmembrane transport
6950	O_BomoMSG16256_complete:A_BomoMSG_c25442_g1_i4 376bp	Bomo_Chr11	solute_carrier_family_35_member_B3_isoform_X1_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0006810 P transport GO:0007275 P multicellular organism development GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030173 C integral component of Golgi membrane GO:0030176 C integral component of endoplasmic reticulum membrane GO:0046963 P 3'-phosphoadenosine 5'-phosphosulfate transport GO:0046964 F 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity GO:0055085 P transmembrane transport GO:1902559 P 3'-phospho-5'-adenylyl sulfate transmembrane transport
6951	O_BomoMSG16257_5prime_partial:A_BomoMSG_c25443_g1_i1 171bp	Bomo_Chr16
6952	O_BomoMSG16258_3prime_partial:A_BomoMSG_c25443_g1_i2 169bp	Bomo_Chr16	arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
6953	O_BomoMSG16259_5prime_partial:A_BomoMSG_c25443_g1_i2 132bp	Bomo_Chr16
6954	O_BomoMSG1625_internal:A_BomoMSG_c7830_g1_i1 104bp	Bomo_Chr3	protein_gustavus_isoform_X4_[Bombyx_mori]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005938 C cell cortex GO:0007275 P multicellular organism development GO:0007280 P pole cell migration GO:0007281 P germ cell development GO:0007314 P oocyte anterior/posterior axis specification GO:0007315 P pole plasm assembly GO:0007472 P wing disc morphogenesis GO:0008104 P protein localization GO:0031466 C Cul5-RING ubiquitin ligase complex GO:0035017 P cuticle pattern formation GO:0035556 P intracellular signal transduction GO:0045495 C pole plasm GO:0045732 P positive regulation of protein catabolic process GO:0046843 P dorsal appendage formation GO:0048471 C perinuclear region of cytoplasm GO:0070449 C elongin complex
6955	O_BomoMSG16260_5prime_partial:A_BomoMSG_c25443_g2_i1 247bp	Bomo_Chr16	arginine/serine-rich_coiled-coil_protein_2_isoform_X2_[Bombyx_mori]
6956	O_BomoMSG16261_complete:A_BomoMSG_c25443_g2_i1 134bp	Bomo_Chr16
6957	O_BomoMSG16262_5prime_partial:A_BomoMSG_c25443_g2_i1 105bp	Bomo_Chr16	arginine/serine-rich_coiled-coil_protein_2_isoform_X5_[Bombyx_mori]
6958	O_BomoMSG16263_3prime_partial:A_BomoMSG_c25443_g1_i3 136bp	Bomo_Chr16	U1_small_nuclear_ribonucleoprotein_70_kDa_isoform_X3_[Bombyx_mori]
6959	O_BomoMSG16264_5prime_partial:A_BomoMSG_c25443_g1_i3 128bp	Bomo_Chr16
6960	O_BomoMSG16265_internal:A_BomoMSG_c25443_g1_i4 129bp	Bomo_Chr16	U1_small_nuclear_ribonucleoprotein_70_kDa_isoform_X3_[Bombyx_mori]