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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6871 O_BomoMSG16185_5prime_partial:A_BomoMSG_c25420_g1_i1
118bp
6872 O_BomoMSG16186_5prime_partial:A_BomoMSG_c25421_g1_i1
216bp
 OTU_domain-containing_protein_6B_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
6873 O_BomoMSG16187_complete:A_BomoMSG_c25421_g1_i2
285bp
 OTU_domain-containing_protein_6B_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
6874 O_BomoMSG16188_complete:A_BomoMSG_c25422_g1_i1
251bp
 cyclin-related_protein_FAM58A_[Bombyx_mori]
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0005634 C nucleus
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0030295 F protein kinase activator activity
GO:0032147 P activation of protein kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
6875 O_BomoMSG16189_complete:A_BomoMSG_c25423_g1_i1
342bp
 putative_inositol_monophosphatase_3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006021 P inositol biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006796 P phosphate-containing compound metabolic process
GO:0007165 P signal transduction
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
6876 O_BomoMSG1618_5prime_partial:A_BomoMSG_c7817_g1_i1
130bp
 hypothetical_protein_I79_018304_[Cricetulus_griseus]
6877 O_BomoMSG16190_5prime_partial:A_BomoMSG_c25423_g1_i2
231bp
 putative_inositol_monophosphatase_3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006021 P inositol biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006796 P phosphate-containing compound metabolic process
GO:0007165 P signal transduction
GO:0008934 F inositol monophosphate 1-phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0052832 F inositol monophosphate 3-phosphatase activity
GO:0052833 F inositol monophosphate 4-phosphatase activity
GO:0052834 F inositol monophosphate phosphatase activity
6878 O_BomoMSG16191_complete:A_BomoMSG_c25424_g1_i3
105bp
 acyl-CoA_thioesterase_13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0047617 F acyl-CoA hydrolase activity
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
6879 O_BomoMSG16192_complete:A_BomoMSG_c25424_g1_i4
143bp
 acyl-CoA_thioesterase_13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0047617 F acyl-CoA hydrolase activity
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
6880 O_BomoMSG16193_5prime_partial:A_BomoMSG_c25426_g1_i1
210bp
 coiled-coil_domain-containing_protein_94_[Bombyx_mori]
GO:0005515 F protein binding
6881 O_BomoMSG16194_complete:A_BomoMSG_c25426_g1_i1
169bp
6882 O_BomoMSG16195_complete:A_BomoMSG_c25426_g1_i2
321bp
 coiled-coil_domain-containing_protein_94_[Bombyx_mori]
GO:0005515 F protein binding
6883 O_BomoMSG16196_complete:A_BomoMSG_c25426_g1_i2
169bp
6884 O_BomoMSG16197_5prime_partial:A_BomoMSG_c25426_g1_i3
185bp
 coiled-coil_domain-containing_protein_94_[Bombyx_mori]
GO:0005515 F protein binding
6885 O_BomoMSG16198_complete:A_BomoMSG_c25426_g1_i3
169bp
6886 O_BomoMSG16199_3prime_partial:A_BomoMSG_c25427_g1_i1
638bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
6887 O_BomoMSG1619_internal:A_BomoMSG_c7820_g1_i1
105bp
 uncharacterized_protein_LOC101743382,_partial_[Bombyx_mori]
6888 O_BomoMSG161_internal:A_BomoMSG_c634_g1_i1
157bp
 uncharacterized_protein_LOC101746464_isoform_X3_[Bombyx_mori]
6889 O_BomoMSG16200_internal:A_BomoMSG_c25427_g1_i2
530bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
6890 O_BomoMSG16201_internal:A_BomoMSG_c25427_g1_i3
553bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
6891 O_BomoMSG16202_5prime_partial:A_BomoMSG_c25428_g2_i1
213bp
 proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
6892 O_BomoMSG16203_3prime_partial:A_BomoMSG_c25429_g1_i1
776bp
 LOW_QUALITY_PROTEIN:_rho_GTPase-activating_protein_44_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
6893 O_BomoMSG16204_complete:A_BomoMSG_c25429_g1_i1
180bp
6894 O_BomoMSG16205_5prime_partial:A_BomoMSG_c25429_g1_i1
114bp
6895 O_BomoMSG16206_3prime_partial:A_BomoMSG_c25429_g1_i2
776bp
 LOW_QUALITY_PROTEIN:_rho_GTPase-activating_protein_44_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
6896 O_BomoMSG16207_complete:A_BomoMSG_c25429_g1_i2
180bp
6897 O_BomoMSG16208_5prime_partial:A_BomoMSG_c25429_g1_i2
114bp
6898 O_BomoMSG16209_complete:A_BomoMSG_c25431_g1_i1
240bp
 eukaryotic_initiation_factor_4E-2_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005845 C mRNA cap binding complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0017148 P negative regulation of translation
GO:0031625 F ubiquitin protein ligase binding
GO:0044822 F RNA binding
6899 O_BomoMSG1620_internal:A_BomoMSG_c7820_g1_i1
105bp
6900 O_BomoMSG16210_complete:A_BomoMSG_c25431_g1_i1
220bp
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