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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5971 O_BomoMSG15375_complete:A_BomoMSG_c25124_g1_i1
148bp
5972 O_BomoMSG15376_complete:A_BomoMSG_c25124_g1_i1
123bp
5973 O_BomoMSG15377_internal:A_BomoMSG_c25125_g1_i1
280bp
 solute_carrier_family_12_member_6_isoform_X3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006821 P chloride transport
GO:0007268 P chemical synaptic transmission
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0015379 F potassium:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0022820 F potassium:chloride symporter activity
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902476 P chloride transmembrane transport
5974 O_BomoMSG15378_complete:A_BomoMSG_c25125_g1_i1
125bp
5975 O_BomoMSG15379_internal:A_BomoMSG_c25125_g1_i2
615bp
 solute_carrier_family_12_member_6_isoform_X3_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0010107 P potassium ion import across plasma membrane
GO:0015079 F potassium ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0015379 F potassium:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0019901 F protein kinase binding
GO:0022820 F potassium:chloride symporter activity
GO:0035826 P obsolete rubidium ion transport
GO:0035827 F obsolete rubidium ion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0071476 P cellular hypotonic response
GO:0071477 P cellular hypotonic salinity response
GO:0071805 P potassium ion transmembrane transport
GO:1902476 P chloride transmembrane transport
5976 O_BomoMSG1537_3prime_partial:A_BomoMSG_c7546_g1_i1
130bp
 hypothetical_protein_KGM_201457_[Danaus_plexippus_plexippus]
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0071557 P histone H3-K27 demethylation
GO:0071558 F histone H3-tri/di-methyl-lysine-27 demethylase activity
5977 O_BomoMSG15380_complete:A_BomoMSG_c25125_g1_i2
125bp
5978 O_BomoMSG15381_complete:A_BomoMSG_c25127_g1_i1
521bp
 insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
5979 O_BomoMSG15382_complete:A_BomoMSG_c25127_g1_i1
172bp
5980 O_BomoMSG15383_complete:A_BomoMSG_c25127_g1_i1
161bp
5981 O_BomoMSG15384_complete:A_BomoMSG_c25127_g1_i1
107bp
5982 O_BomoMSG15385_complete:A_BomoMSG_c25127_g1_i1
102bp
5983 O_BomoMSG15386_5prime_partial:A_BomoMSG_c25127_g1_i2
456bp
 insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
5984 O_BomoMSG15387_3prime_partial:A_BomoMSG_c25127_g1_i2
149bp
5985 O_BomoMSG15388_3prime_partial:A_BomoMSG_c25127_g1_i2
112bp
5986 O_BomoMSG15389_complete:A_BomoMSG_c25127_g1_i2
107bp
5987 O_BomoMSG1538_internal:A_BomoMSG_c7547_g1_i1
116bp
 uncharacterized_protein_LOC110386104_[Bombyx_mori]
5988 O_BomoMSG15390_complete:A_BomoMSG_c25127_g1_i2
102bp
5989 O_BomoMSG15391_complete:A_BomoMSG_c25127_g1_i3
507bp
 insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
5990 O_BomoMSG15392_complete:A_BomoMSG_c25127_g1_i3
182bp
5991 O_BomoMSG15393_complete:A_BomoMSG_c25127_g1_i3
172bp
5992 O_BomoMSG15394_complete:A_BomoMSG_c25127_g1_i3
107bp
5993 O_BomoMSG15395_complete:A_BomoMSG_c25127_g1_i3
102bp
5994 O_BomoMSG15396_complete:A_BomoMSG_c25127_g1_i4
521bp
 insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
5995 O_BomoMSG15397_complete:A_BomoMSG_c25127_g1_i4
172bp
5996 O_BomoMSG15398_complete:A_BomoMSG_c25127_g1_i4
161bp
5997 O_BomoMSG15399_complete:A_BomoMSG_c25127_g1_i4
107bp
5998 O_BomoMSG1539_internal:A_BomoMSG_c7547_g1_i1
116bp
5999 O_BomoMSG153_internal:A_BomoMSG_c572_g1_i1
176bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007165 P signal transduction
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016605 C PML body
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0035584 P calcium-mediated signaling using intracellular calcium source
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046982 F protein heterodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0051491 P positive regulation of filopodium assembly
GO:0097264 P self proteolysis
6000 O_BomoMSG15400_complete:A_BomoMSG_c25127_g1_i4
102bp
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