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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5941 O_BomoMSG15348_complete:A_BomoMSG_c25112_g1_i1
208bp
 guanylate_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004385 F guanylate kinase activity
GO:0005524 F ATP binding
GO:0006163 P purine nucleotide metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
5942 O_BomoMSG15349_complete:A_BomoMSG_c25112_g1_i1
148bp
5943 O_BomoMSG1534_internal:A_BomoMSG_c7508_g1_i1
117bp
 helicase_POLQ-like_isoform_X2_[Bombyx_mori]
5944 O_BomoMSG15350_complete:A_BomoMSG_c25113_g1_i1
325bp
 glyoxylate_reductase/hydroxypyruvate_reductase_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
5945 O_BomoMSG15351_3prime_partial:A_BomoMSG_c25114_g1_i1
373bp
 uncharacterized_protein_LOC101746816_[Bombyx_mori]
5946 O_BomoMSG15352_3prime_partial:A_BomoMSG_c25116_g1_i1
215bp
 ATP-dependent_zinc_metalloprotease_YME1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5947 O_BomoMSG15353_3prime_partial:A_BomoMSG_c25116_g1_i1
146bp
5948 O_BomoMSG15354_internal:A_BomoMSG_c25116_g1_i2
628bp
 ATP-dependent_zinc_metalloprotease_YME1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5949 O_BomoMSG15355_complete:A_BomoMSG_c25116_g1_i2
165bp
 unknown_[Zea_mays]
5950 O_BomoMSG15356_complete:A_BomoMSG_c25116_g1_i2
127bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
5951 O_BomoMSG15357_3prime_partial:A_BomoMSG_c25116_g1_i4
672bp
 ATP-dependent_zinc_metalloprotease_YME1_homolog_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5952 O_BomoMSG15358_complete:A_BomoMSG_c25116_g1_i4
165bp
 unknown_[Zea_mays]
5953 O_BomoMSG15359_complete:A_BomoMSG_c25116_g1_i4
127bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
5954 O_BomoMSG1535_internal:A_BomoMSG_c7542_g1_i1
134bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5955 O_BomoMSG15360_3prime_partial:A_BomoMSG_c25116_g1_i5
668bp
 ATP-dependent_zinc_metalloprotease_YME1_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5956 O_BomoMSG15361_complete:A_BomoMSG_c25116_g1_i5
165bp
 unknown_[Zea_mays]
5957 O_BomoMSG15362_complete:A_BomoMSG_c25116_g1_i5
127bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
5958 O_BomoMSG15363_complete:A_BomoMSG_c25117_g1_i1
695bp
 dynamin-1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
5959 O_BomoMSG15364_complete:A_BomoMSG_c25117_g1_i1
101bp
 hypothetical_protein_AX774_g4397_[Zancudomyces_culisetae]
5960 O_BomoMSG15365_complete:A_BomoMSG_c25117_g1_i2
689bp
 dynamin-1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000266 P mitochondrial fission
GO:0001836 P release of cytochrome c from mitochondria
GO:0003374 P dynamin family protein polymerization involved in mitochondrial fission
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0010821 P regulation of mitochondrion organization
GO:0012501 P programmed cell death
GO:0012505 C endomembrane system
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016559 P peroxisome fission
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0032459 P regulation of protein oligomerization
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:0051289 P protein homotetramerization
GO:0060047 P heart contraction
GO:0061025 P membrane fusion
GO:0070266 P necroptotic process
GO:0070584 P mitochondrion morphogenesis
GO:0070585 P protein localization to mitochondrion
GO:0090141 P positive regulation of mitochondrial fission
GO:0090149 P mitochondrial membrane fission
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:1900063 P regulation of peroxisome organization
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903578 P regulation of ATP metabolic process
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
5961 O_BomoMSG15366_complete:A_BomoMSG_c25117_g1_i2
101bp
 hypothetical_protein_AX774_g4397_[Zancudomyces_culisetae]
5962 O_BomoMSG15367_complete:A_BomoMSG_c25118_g2_i1
144bp
 RNA_binding_motif_protein_18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0098792 P xenophagy
5963 O_BomoMSG15368_5prime_partial:A_BomoMSG_c25119_g1_i1
212bp
 proteasome_26S_non-ATPase_subunit_9_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0032024 P positive regulation of insulin secretion
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043425 F bHLH transcription factor binding
GO:0043488 P regulation of mRNA stability
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046676 P negative regulation of insulin secretion
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070682 P proteasome regulatory particle assembly
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
5964 O_BomoMSG15369_complete:A_BomoMSG_c25119_g1_i2
215bp
 proteasome_26S_non-ATPase_subunit_9_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0032024 P positive regulation of insulin secretion
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043425 F bHLH transcription factor binding
GO:0043488 P regulation of mRNA stability
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046676 P negative regulation of insulin secretion
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070682 P proteasome regulatory particle assembly
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
5965 O_BomoMSG1536_5prime_partial:A_BomoMSG_c7542_g1_i1
121bp
5966 O_BomoMSG15370_5prime_partial:A_BomoMSG_c25121_g1_i1
195bp
 uncharacterized_protein_LOC101736188_isoform_X1_[Bombyx_mori]
5967 O_BomoMSG15371_5prime_partial:A_BomoMSG_c25121_g1_i2
123bp
 uncharacterized_protein_LOC101736188_isoform_X1_[Bombyx_mori]
5968 O_BomoMSG15372_3prime_partial:A_BomoMSG_c25121_g2_i1
125bp
 uncharacterized_protein_LOC101736188_isoform_X1_[Bombyx_mori]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
5969 O_BomoMSG15373_3prime_partial:A_BomoMSG_c25121_g2_i2
125bp
 uncharacterized_protein_LOC101736188_isoform_X1_[Bombyx_mori]
GO:0005375 F copper ion transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006825 P copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035434 P copper ion transmembrane transport
5970 O_BomoMSG15374_5prime_partial:A_BomoMSG_c25124_g1_i1
561bp
 bromodomain-containing_protein_8_isoform_X3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
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