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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5911 O_BomoMSG15320_complete:A_BomoMSG_c25097_g1_i6
392bp
5912 O_BomoMSG15321_complete:A_BomoMSG_c25097_g1_i6
223bp
5913 O_BomoMSG15322_complete:A_BomoMSG_c25097_g1_i6
213bp
5914 O_BomoMSG15323_complete:A_BomoMSG_c25097_g1_i6
185bp
5915 O_BomoMSG15324_complete:A_BomoMSG_c25097_g1_i6
118bp
5916 O_BomoMSG15325_5prime_partial:A_BomoMSG_c25097_g1_i6
107bp
5917 O_BomoMSG15326_3prime_partial:A_BomoMSG_c25097_g1_i7
111bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
5918 O_BomoMSG15327_complete:A_BomoMSG_c25099_g1_i2
369bp
 enoyl-[acyl-carrier-protein]_reductase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0019166 F trans-2-enoyl-CoA reductase (NADPH) activity
GO:0055114 P obsolete oxidation-reduction process
5919 O_BomoMSG15328_complete:A_BomoMSG_c25099_g1_i2
114bp
5920 O_BomoMSG15329_complete:A_BomoMSG_c25099_g1_i3
141bp
 enoyl-[acyl-carrier-protein]_reductase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0019166 F trans-2-enoyl-CoA reductase (NADPH) activity
GO:0055114 P obsolete oxidation-reduction process
5921 O_BomoMSG1532_internal:A_BomoMSG_c7507_g1_i1
129bp
 uncharacterized_protein_LOC101738377_isoform_X2_[Bombyx_mori]
5922 O_BomoMSG15330_5prime_partial:A_BomoMSG_c25101_g1_i1
250bp
 negative_elongation_factor_A_isoform_X1_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
5923 O_BomoMSG15331_complete:A_BomoMSG_c25101_g1_i2
119bp
 negative_elongation_factor_A_isoform_X2_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
5924 O_BomoMSG15332_5prime_partial:A_BomoMSG_c25103_g1_i2
207bp
 cyclin_dependent_kinase_12_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0022008 P neurogenesis
GO:0030332 F cyclin binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
GO:0090277 P positive regulation of peptide hormone secretion
5925 O_BomoMSG15333_complete:A_BomoMSG_c25104_g1_i1
609bp
 gametogenetin-binding_protein_2-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
5926 O_BomoMSG15334_5prime_partial:A_BomoMSG_c25105_g1_i1
134bp
5927 O_BomoMSG15335_complete:A_BomoMSG_c25106_g2_i1
150bp
 gametocyte-specific_factor_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
5928 O_BomoMSG15336_complete:A_BomoMSG_c25106_g2_i1
104bp
5929 O_BomoMSG15337_complete:A_BomoMSG_c25106_g2_i2
138bp
 gametocyte-specific_factor_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
5930 O_BomoMSG15338_internal:A_BomoMSG_c25108_g1_i2
147bp
5931 O_BomoMSG15339_internal:A_BomoMSG_c25108_g1_i2
147bp
 RNA-binding_protein_25_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0008017 F microtubule binding
GO:0030030 P cell projection organization
GO:0030992 C intraciliary transport particle B
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048793 P pronephros development
GO:0070507 P regulation of microtubule cytoskeleton organization
5932 O_BomoMSG1533_5prime_partial:A_BomoMSG_c7507_g1_i1
119bp
5933 O_BomoMSG15340_5prime_partial:A_BomoMSG_c25108_g1_i2
109bp
 Protein_IWS1-like_[Papilio_xuthus]
5934 O_BomoMSG15341_internal:A_BomoMSG_c25108_g1_i5
109bp
5935 O_BomoMSG15342_5prime_partial:A_BomoMSG_c25108_g1_i5
104bp
5936 O_BomoMSG15343_internal:A_BomoMSG_c25108_g1_i6
108bp
 RNA-binding_protein_25_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
5937 O_BomoMSG15344_internal:A_BomoMSG_c25108_g1_i6
108bp
5938 O_BomoMSG15345_5prime_partial:A_BomoMSG_c25108_g1_i6
100bp
5939 O_BomoMSG15346_complete:A_BomoMSG_c25109_g1_i3
116bp
 phospholipid_scramblase_1_[Bombyx_mori]
5940 O_BomoMSG15347_internal:A_BomoMSG_c25111_g1_i1
102bp
 endonuclease,_partial_[Bombyx_mori]
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