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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5641 O_BomoMSG15078_5prime_partial:A_BomoMSG_c25045_g1_i1
534bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
5642 O_BomoMSG15079_complete:A_BomoMSG_c25045_g1_i1
148bp
5643 O_BomoMSG1507_complete:A_BomoMSG_c7441_g1_i2
609bp
 protein_DEK_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
5644 O_BomoMSG15080_complete:A_BomoMSG_c25045_g1_i1
147bp
5645 O_BomoMSG15081_complete:A_BomoMSG_c25045_g1_i1
125bp
5646 O_BomoMSG15082_5prime_partial:A_BomoMSG_c25045_g1_i2
214bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
5647 O_BomoMSG15083_complete:A_BomoMSG_c25045_g1_i2
125bp
5648 O_BomoMSG15084_5prime_partial:A_BomoMSG_c25045_g1_i4
363bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
5649 O_BomoMSG15085_complete:A_BomoMSG_c25045_g1_i4
125bp
5650 O_BomoMSG15086_complete:A_BomoMSG_c25046_g1_i1
293bp
 uncharacterized_protein_LOC101741377_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0016553 P base conversion or substitution editing
GO:0016556 P mRNA modification
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0042803 F protein homodimerization activity
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0050685 P positive regulation of mRNA processing
GO:0051726 P regulation of cell cycle
5651 O_BomoMSG15087_complete:A_BomoMSG_c25046_g1_i1
223bp
5652 O_BomoMSG15088_complete:A_BomoMSG_c25046_g1_i2
342bp
 uncharacterized_protein_LOC101741377_isoform_X1_[Bombyx_mori]
5653 O_BomoMSG15089_complete:A_BomoMSG_c25046_g1_i2
223bp
5654 O_BomoMSG1508_complete:A_BomoMSG_c7441_g1_i2
316bp
5655 O_BomoMSG15090_internal:A_BomoMSG_c25047_g2_i1
404bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5656 O_BomoMSG15091_5prime_partial:A_BomoMSG_c25047_g2_i1
133bp
5657 O_BomoMSG15092_internal:A_BomoMSG_c25047_g2_i2
258bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5658 O_BomoMSG15093_5prime_partial:A_BomoMSG_c25047_g2_i2
133bp
5659 O_BomoMSG15094_internal:A_BomoMSG_c25047_g2_i3
664bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5660 O_BomoMSG15095_5prime_partial:A_BomoMSG_c25047_g2_i3
133bp
5661 O_BomoMSG15096_complete:A_BomoMSG_c25047_g2_i3
109bp
5662 O_BomoMSG15097_internal:A_BomoMSG_c25047_g2_i4
221bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5663 O_BomoMSG15098_5prime_partial:A_BomoMSG_c25047_g2_i4
133bp
5664 O_BomoMSG15099_internal:A_BomoMSG_c25047_g2_i5
548bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5665 O_BomoMSG1509_complete:A_BomoMSG_c7441_g1_i2
180bp
5666 O_BomoMSG150_internal:A_BomoMSG_c562_g1_i1
103bp
 uncharacterized_protein_LOC101738488_isoform_X1_[Bombyx_mori]
5667 O_BomoMSG15100_5prime_partial:A_BomoMSG_c25047_g2_i5
133bp
5668 O_BomoMSG15101_internal:A_BomoMSG_c25047_g2_i6
524bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5669 O_BomoMSG15102_5prime_partial:A_BomoMSG_c25047_g2_i6
133bp
5670 O_BomoMSG15103_5prime_partial:A_BomoMSG_c25048_g2_i1
307bp
 uncharacterized_protein_LOC101740721_[Bombyx_mori]
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