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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5671 O_BomoMSG15104_5prime_partial:A_BomoMSG_c25048_g2_i2
267bp
 uncharacterized_protein_LOC101740721_[Bombyx_mori]
5672 O_BomoMSG15105_internal:A_BomoMSG_c25049_g1_i1
139bp
 GPI_transamidase_component_PIG-T_[Bombyx_mori]
GO:0003923 F GPI-anchor transamidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016255 P attachment of GPI anchor to protein
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030182 P neuron differentiation
GO:0042765 C GPI-anchor transamidase complex
GO:0051402 P neuron apoptotic process
5673 O_BomoMSG15106_internal:A_BomoMSG_c25049_g2_i1
364bp
 GPI_transamidase_component_PIG-T_[Bombyx_mori]
GO:0003923 F GPI-anchor transamidase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016255 P attachment of GPI anchor to protein
GO:0030182 P neuron differentiation
GO:0042765 C GPI-anchor transamidase complex
GO:0051402 P neuron apoptotic process
5674 O_BomoMSG15107_3prime_partial:A_BomoMSG_c25049_g1_i2
192bp
 GPI_transamidase_component_PIG-T_[Bombyx_mori]
GO:0003923 F GPI-anchor transamidase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016255 P attachment of GPI anchor to protein
GO:0030182 P neuron differentiation
GO:0042765 C GPI-anchor transamidase complex
GO:0051402 P neuron apoptotic process
5675 O_BomoMSG15108_3prime_partial:A_BomoMSG_c25050_g1_i2
232bp
 Poly(U)-binding-splicing_factor_half_pint,_partial_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
5676 O_BomoMSG15109_complete:A_BomoMSG_c25050_g1_i2
164bp
 hypothetical_protein_ALC60_10959_[Trachymyrmex_zeteki]
5677 O_BomoMSG1510_complete:A_BomoMSG_c7441_g1_i2
112bp
5678 O_BomoMSG15110_5prime_partial:A_BomoMSG_c25050_g1_i3
116bp
5679 O_BomoMSG15111_internal:A_BomoMSG_c25050_g1_i4
125bp
 poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
5680 O_BomoMSG15112_5prime_partial:A_BomoMSG_c25051_g1_i1
291bp
 PREDICTED:_uncharacterized_protein_LOC106125042_[Papilio_xuthus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5681 O_BomoMSG15113_3prime_partial:A_BomoMSG_c25052_g1_i1
1319bp
 splicing_factor_3B_subunit_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5682 O_BomoMSG15114_complete:A_BomoMSG_c25052_g1_i1
156bp
5683 O_BomoMSG15115_complete:A_BomoMSG_c25052_g1_i1
112bp
5684 O_BomoMSG15116_internal:A_BomoMSG_c25052_g1_i2
1266bp
 splicing_factor_3B_subunit_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
5685 O_BomoMSG15117_complete:A_BomoMSG_c25052_g1_i2
156bp
5686 O_BomoMSG15118_complete:A_BomoMSG_c25052_g1_i2
112bp
5687 O_BomoMSG15119_5prime_partial:A_BomoMSG_c25053_g1_i1
114bp
5688 O_BomoMSG1511_internal:A_BomoMSG_c7443_g1_i1
160bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
5689 O_BomoMSG15120_3prime_partial:A_BomoMSG_c25053_g1_i1
112bp
 PREDICTED:_dual_specificity_mitogen-activated_protein_kinase_kinase_4-like_[Amyelois_transitella]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007254 P JNK cascade
GO:0007257 P obsolete activation of JUN kinase activity
GO:0009611 P response to wounding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0034393 P positive regulation of smooth muscle cell apoptotic process
GO:0071260 P cellular response to mechanical stimulus
GO:2000672 P negative regulation of motor neuron apoptotic process
5690 O_BomoMSG15121_internal:A_BomoMSG_c25054_g1_i1
119bp
 myosin-IA-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0042623 F ATP hydrolysis activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
5691 O_BomoMSG15122_internal:A_BomoMSG_c25054_g1_i2
442bp
 PREDICTED:_myosin-IA_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0042623 F ATP hydrolysis activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
5692 O_BomoMSG15123_5prime_partial:A_BomoMSG_c25054_g1_i2
180bp
5693 O_BomoMSG15124_3prime_partial:A_BomoMSG_c25054_g1_i2
135bp
5694 O_BomoMSG15125_internal:A_BomoMSG_c25054_g1_i3
423bp
 PREDICTED:_myosin-IA_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0042623 F ATP hydrolysis activity
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
5695 O_BomoMSG15126_3prime_partial:A_BomoMSG_c25054_g1_i3
116bp
5696 O_BomoMSG15127_complete:A_BomoMSG_c25055_g1_i1
407bp
 lanC-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0070062 C extracellular exosome
5697 O_BomoMSG15128_5prime_partial:A_BomoMSG_c25055_g1_i2
329bp
 lanC-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
5698 O_BomoMSG15129_complete:A_BomoMSG_c25056_g1_i1
409bp
 STAM-binding_protein-like_A_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
5699 O_BomoMSG1512_internal:A_BomoMSG_c7445_g1_i1
146bp
 solute_carrier_family_25_member_35_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5700 O_BomoMSG15130_internal:A_BomoMSG_c25057_g1_i1
587bp
 telomerase-binding_protein_EST1A,_partial_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000333 C telomerase catalytic core complex
GO:0000723 P telomere maintenance
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016787 F hydrolase activity
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0043021 F ribonucleoprotein complex binding
GO:0046872 F metal ion binding
GO:0070034 F telomerase RNA binding
GO:0070182 F DNA polymerase binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1904354 P negative regulation of telomere capping
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