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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5581 O_BomoMSG15023_internal:A_BomoMSG_c25017_g1_i3
196bp
 uncharacterized_protein_LOC101735598_[Bombyx_mori]
5582 O_BomoMSG15024_internal:A_BomoMSG_c25018_g1_i1
256bp
 cycle_like_factor_b_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053 P circadian regulation of heart rate
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0032922 P circadian regulation of gene expression
GO:0042594 P response to starvation
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048148 P behavioral response to cocaine
GO:0048511 P rhythmic process
5583 O_BomoMSG15025_3prime_partial:A_BomoMSG_c25018_g1_i2
654bp
 Cycle_like_factor_b_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000976 F transcription cis-regulatory region binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001190 F obsolete transcriptional activator activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007623 P circadian rhythm
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0017162 F aryl hydrocarbon receptor binding
GO:0032007 P negative regulation of TOR signaling
GO:0032922 P circadian regulation of gene expression
GO:0033391 C chromatoid body
GO:0042176 P regulation of protein catabolic process
GO:0042634 P regulation of hair cycle
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045599 P negative regulation of fat cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0050767 P regulation of neurogenesis
GO:0050796 P regulation of insulin secretion
GO:0051726 P regulation of cell cycle
GO:0051775 P response to redox state
GO:0051879 F Hsp90 protein binding
GO:0060137 P maternal process involved in parturition
GO:0070491 F DNA-binding transcription factor binding
GO:0070888 F E-box binding
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0090403 P oxidative stress-induced premature senescence
GO:2000074 P regulation of type B pancreatic cell development
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000772 P regulation of cellular senescence
GO:2001016 P positive regulation of skeletal muscle cell differentiation
5584 O_BomoMSG15026_internal:A_BomoMSG_c25018_g1_i3
231bp
 cycle_like_factor_b_isoform_X2_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000976 F transcription cis-regulatory region binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001190 F obsolete transcriptional activator activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007623 P circadian rhythm
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0017162 F aryl hydrocarbon receptor binding
GO:0032007 P negative regulation of TOR signaling
GO:0032922 P circadian regulation of gene expression
GO:0033391 C chromatoid body
GO:0042176 P regulation of protein catabolic process
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045599 P negative regulation of fat cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0050767 P regulation of neurogenesis
GO:0050796 P regulation of insulin secretion
GO:0051726 P regulation of cell cycle
GO:0051775 P response to redox state
GO:0051879 F Hsp90 protein binding
GO:0060137 P maternal process involved in parturition
GO:0070491 F DNA-binding transcription factor binding
GO:0070888 F E-box binding
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0090403 P oxidative stress-induced premature senescence
GO:2000074 P regulation of type B pancreatic cell development
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000772 P regulation of cellular senescence
GO:2001016 P positive regulation of skeletal muscle cell differentiation
5585 O_BomoMSG15027_5prime_partial:A_BomoMSG_c25020_g1_i2
126bp
5586 O_BomoMSG15028_complete:A_BomoMSG_c25020_g2_i1
166bp
 mitochondrial_import_inner_membrane_translocase_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0015266 F protein transmembrane transporter activity
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0031305 C integral component of mitochondrial inner membrane
5587 O_BomoMSG15029_complete:A_BomoMSG_c25020_g2_i1
122bp
 unnamed_protein_product_[Ostreococcus_tauri]
5588 O_BomoMSG1502_5prime_partial:A_BomoMSG_c7437_g1_i1
104bp
 ribosome_biogenesis_protein_BOP1,_putative_(BOP1)_[Plasmodium_ovale_curtisi]
5589 O_BomoMSG15030_5prime_partial:A_BomoMSG_c25021_g1_i2
133bp
 diacylglycerol_kinase_epsilon_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030168 P platelet activation
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
5590 O_BomoMSG15031_internal:A_BomoMSG_c25021_g2_i1
381bp
 diacylglycerol_kinase_epsilon_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
5591 O_BomoMSG15032_internal:A_BomoMSG_c25021_g2_i2
295bp
 diacylglycerol_kinase_epsilon_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030168 P platelet activation
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
5592 O_BomoMSG15033_5prime_partial:A_BomoMSG_c25022_g1_i1
610bp
 sodium/potassium-transporting_ATPase_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0001894 P tissue homeostasis
GO:0005391 F P-type sodium:potassium-exchanging transporter activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005890 C sodium:potassium-exchanging ATPase complex
GO:0005918 C septate junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006883 P cellular sodium ion homeostasis
GO:0007268 P chemical synaptic transmission
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007630 P jump response
GO:0008152 P metabolic process
GO:0008324 F cation transmembrane transporter activity
GO:0008340 P determination of adult lifespan
GO:0008344 P adult locomotory behavior
GO:0008360 P regulation of cell shape
GO:0009266 P response to temperature stimulus
GO:0009612 P response to mechanical stimulus
GO:0010107 P potassium ion import across plasma membrane
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0015991 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019991 P septate junction assembly
GO:0030007 P cellular potassium ion homeostasis
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0036376 P sodium ion export across plasma membrane
GO:0046872 F metal ion binding
GO:0050905 P neuromuscular process
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0060439 P trachea morphogenesis
5593 O_BomoMSG15034_5prime_partial:A_BomoMSG_c25022_g1_i1
221bp
 hypothetical_protein_ALC56_07164,_partial_[Trachymyrmex_septentrionalis]
5594 O_BomoMSG15035_complete:A_BomoMSG_c25022_g1_i1
190bp
 hypothetical_protein_ALC62_06051_[Cyphomyrmex_costatus]
5595 O_BomoMSG15036_5prime_partial:A_BomoMSG_c25022_g1_i2
649bp
 sodium/potassium-transporting_ATPase_subunit_alpha_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0001894 P tissue homeostasis
GO:0005391 F P-type sodium:potassium-exchanging transporter activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005890 C sodium:potassium-exchanging ATPase complex
GO:0005918 C septate junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006883 P cellular sodium ion homeostasis
GO:0007268 P chemical synaptic transmission
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007630 P jump response
GO:0008152 P metabolic process
GO:0008324 F cation transmembrane transporter activity
GO:0008340 P determination of adult lifespan
GO:0008344 P adult locomotory behavior
GO:0008360 P regulation of cell shape
GO:0009266 P response to temperature stimulus
GO:0009612 P response to mechanical stimulus
GO:0010107 P potassium ion import across plasma membrane
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0015991 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019991 P septate junction assembly
GO:0030007 P cellular potassium ion homeostasis
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0036376 P sodium ion export across plasma membrane
GO:0046872 F metal ion binding
GO:0050905 P neuromuscular process
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0060439 P trachea morphogenesis
5596 O_BomoMSG15037_complete:A_BomoMSG_c25022_g1_i2
190bp
 hypothetical_protein_ALC62_06051_[Cyphomyrmex_costatus]
5597 O_BomoMSG15038_internal:A_BomoMSG_c25023_g1_i1
578bp
 protein_mahjong_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0035212 P cell competition in a multicellular organism
5598 O_BomoMSG15039_complete:A_BomoMSG_c25023_g1_i1
106bp
5599 O_BomoMSG1503_complete:A_BomoMSG_c7441_g1_i1
637bp
 protein_DEK_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
5600 O_BomoMSG15040_5prime_partial:A_BomoMSG_c25023_g1_i1
101bp
5601 O_BomoMSG15041_3prime_partial:A_BomoMSG_c25023_g1_i2
232bp
 protein_mahjong_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0035212 P cell competition in a multicellular organism
5602 O_BomoMSG15042_complete:A_BomoMSG_c25023_g1_i2
106bp
5603 O_BomoMSG15043_5prime_partial:A_BomoMSG_c25023_g1_i2
101bp
5604 O_BomoMSG15044_complete:A_BomoMSG_c25024_g2_i5
110bp
 uncharacterized_protein_LOC101746752_isoform_X1_[Bombyx_mori]
5605 O_BomoMSG15045_complete:A_BomoMSG_c25024_g2_i6
110bp
 uncharacterized_protein_LOC101746752_isoform_X1_[Bombyx_mori]
5606 O_BomoMSG15046_complete:A_BomoMSG_c25024_g2_i7
110bp
 uncharacterized_protein_LOC101746752_isoform_X1_[Bombyx_mori]
5607 O_BomoMSG15047_complete:A_BomoMSG_c25024_g2_i9
234bp
 uncharacterized_protein_LOC101746752_isoform_X1_[Bombyx_mori]
5608 O_BomoMSG15048_internal:A_BomoMSG_c25025_g1_i1
557bp
 LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0002092 P positive regulation of receptor internalization
GO:0003383 P apical constriction
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006612 P protein targeting to membrane
GO:0007049 P cell cycle
GO:0007163 P establishment or maintenance of cell polarity
GO:0008289 F lipid binding
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0022011 P myelination in peripheral nervous system
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0031643 P positive regulation of myelination
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032970 P regulation of actin filament-based process
GO:0033269 C internode region of axon
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043234 C protein-containing complex
GO:0044319 P wound healing, spreading of cells
GO:0045177 C apical part of cell
GO:0051301 P cell division
GO:0051642 P centrosome localization
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
5609 O_BomoMSG15049_complete:A_BomoMSG_c25025_g1_i1
113bp
5610 O_BomoMSG1504_complete:A_BomoMSG_c7441_g1_i1
316bp
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