Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
541	O_BomoMSG10488_3prime_partial:A_BomoMSG_c22720_g1_i1 256bp	Bomo_Chr15	beta_carbonic_anhydrase_1_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0004089 F carbonate dehydratase activity GO:0005575 C cellular_component GO:0008150 P biological_process GO:0008152 P metabolic process GO:0008270 F zinc ion binding GO:0016829 F lyase activity GO:0046872 F metal ion binding
542	O_BomoMSG10489_3prime_partial:A_BomoMSG_c22720_g1_i2 256bp	Bomo_Chr15	beta_carbonic_anhydrase_1_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0004089 F carbonate dehydratase activity GO:0005575 C cellular_component GO:0008150 P biological_process GO:0008152 P metabolic process GO:0008270 F zinc ion binding GO:0016829 F lyase activity GO:0046872 F metal ion binding
543	O_BomoMSG1048_3prime_partial:A_BomoMSG_c4875_g1_i1 123bp	Bomo_Chr16	required_for_meiotic_nuclear_division_protein_1_homolog_[Bombyx_mori]
544	O_BomoMSG10490_5prime_partial:A_BomoMSG_c22721_g1_i1 339bp	Bomo_Chr10	protein-tyrosine_sulfotransferase_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005794 C Golgi apparatus GO:0006478 P peptidyl-tyrosine sulfation GO:0008476 F protein-tyrosine sulfotransferase activity GO:0009306 P protein secretion GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity
545	O_BomoMSG10491_complete:A_BomoMSG_c22721_g1_i1 200bp	Bomo_Chr10
546	O_BomoMSG10492_5prime_partial:A_BomoMSG_c22721_g1_i1 128bp	Bomo_Chr10
547	O_BomoMSG10493_5prime_partial:A_BomoMSG_c22723_g1_i1 211bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA0754_[Bombyx_mori]
548	O_BomoMSG10494_5prime_partial:A_BomoMSG_c22723_g1_i2 217bp	Bomo_Chr5
549	O_BomoMSG10495_5prime_partial:A_BomoMSG_c22723_g1_i2 213bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA0754_[Bombyx_mori]
550	O_BomoMSG10496_5prime_partial:A_BomoMSG_c22723_g1_i2 200bp	Bomo_Chr5
551	O_BomoMSG10497_5prime_partial:A_BomoMSG_c22723_g1_i3 213bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA0754_[Bombyx_mori]
552	O_BomoMSG10498_5prime_partial:A_BomoMSG_c22723_g1_i4 213bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA0754_[Bombyx_mori]
553	O_BomoMSG10499_internal:A_BomoMSG_c22724_g1_i1 247bp	Bomo_Chr9	uncharacterized_protein_LOC101739231_[Bombyx_mori]
554	O_BomoMSG1049_internal:A_BomoMSG_c4880_g1_i1 142bp	Bomo_Chr21	unconventional_myosin-IXa_isoform_X3_[Bombyx_mori]	GO:0000146 F microfilament motor activity GO:0000166 F nucleotide binding GO:0001726 C ruffle GO:0003774 F cytoskeletal motor activity GO:0003779 F actin binding GO:0005096 F GTPase activator activity GO:0005515 F protein binding GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005884 C actin filament GO:0005938 C cell cortex GO:0007165 P signal transduction GO:0007266 P Rho protein signal transduction GO:0008152 P metabolic process GO:0008270 F zinc ion binding GO:0016459 C myosin complex GO:0016887 F ATP hydrolysis activity GO:0030027 C lamellipodium GO:0030048 P actin filament-based movement GO:0030898 F microfilament motor activity GO:0035023 P regulation of Rho protein signal transduction GO:0035385 P Roundabout signaling pathway GO:0035556 P intracellular signal transduction GO:0043008 F ATP-dependent protein binding GO:0043531 F ADP binding GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding GO:0048471 C perinuclear region of cytoplasm GO:0051015 F actin filament binding
555	O_BomoMSG104_internal:A_BomoMSG_c374_g1_i1 124bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]
556	O_BomoMSG10500_internal:A_BomoMSG_c22724_g1_i1 247bp	Bomo_Chr9
557	O_BomoMSG10501_5prime_partial:A_BomoMSG_c22724_g1_i1 194bp	Bomo_Chr9
558	O_BomoMSG10502_complete:A_BomoMSG_c22724_g1_i1 131bp	Bomo_Chr9
559	O_BomoMSG10503_complete:A_BomoMSG_c22724_g1_i1 117bp	Bomo_Chr9
560	O_BomoMSG10504_internal:A_BomoMSG_c22725_g1_i1 186bp	Bomo_Chr6	vegetative_cell_wall_protein_gp1-like_isoform_X1_[Bombyx_mori]
561	O_BomoMSG10505_internal:A_BomoMSG_c22726_g2_i1 184bp	Bomo_Chr14	eukaryotic_translation_initiation_factor_2D_isoform_X1_[Bombyx_mori]	GO:0001731 P formation of translation preinitiation complex GO:0002192 P IRES-dependent translational initiation of linear mRNA GO:0003723 F RNA binding GO:0003743 F translation initiation factor activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006412 P translation GO:0006413 P translational initiation GO:0022627 C cytosolic small ribosomal subunit GO:0032790 P ribosome disassembly
562	O_BomoMSG10506_3prime_partial:A_BomoMSG_c22726_g2_i1 107bp	Bomo_Chr14
563	O_BomoMSG10507_internal:A_BomoMSG_c22727_g1_i1 200bp	Bomo_Chr16	FancJ-like_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006139 P nucleobase-containing compound metabolic process GO:0006281 P DNA repair GO:0006357 P regulation of transcription by RNA polymerase II GO:0006974 P cellular response to DNA damage stimulus GO:0008026 F helicase activity GO:0016787 F hydrolase activity GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0031965 C nuclear membrane GO:0032508 P DNA duplex unwinding GO:0046872 F metal ion binding GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding
564	O_BomoMSG10508_internal:A_BomoMSG_c22727_g1_i2 297bp	Bomo_Chr16	FancJ-like_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0004003 F DNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006139 P nucleobase-containing compound metabolic process GO:0006281 P DNA repair GO:0006357 P regulation of transcription by RNA polymerase II GO:0006974 P cellular response to DNA damage stimulus GO:0008026 F helicase activity GO:0008285 P negative regulation of cell population proliferation GO:0016787 F hydrolase activity GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0031965 C nuclear membrane GO:0032508 P DNA duplex unwinding GO:0046872 F metal ion binding GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding GO:0071295 P cellular response to vitamin
565	O_BomoMSG10509_complete:A_BomoMSG_c22731_g1_i2 263bp	Bomo_Chr1	syntaxin-7_[Bombyx_mori]	GO:0000149 F SNARE binding GO:0001772 C immunological synapse GO:0001916 P positive regulation of T cell mediated cytotoxicity GO:0005484 F SNAP receptor activity GO:0005515 F protein binding GO:0005764 C lysosome GO:0005765 C lysosomal membrane GO:0005768 C endosome GO:0005769 C early endosome GO:0005770 C late endosome GO:0005886 C plasma membrane GO:0006886 P intracellular protein transport GO:0006906 P vesicle fusion GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016192 P vesicle-mediated transport GO:0019869 F chloride channel inhibitor activity GO:0019905 F syntaxin binding GO:0030139 C endocytic vesicle GO:0031201 C SNARE complex GO:0031901 C early endosome membrane GO:0031982 C vesicle GO:0042582 C azurophil granule GO:0043231 C intracellular membrane-bounded organelle GO:0048278 P vesicle docking GO:0048471 C perinuclear region of cytoplasm GO:0051640 P organelle localization GO:0055037 C recycling endosome GO:0070062 C extracellular exosome GO:0070820 C tertiary granule GO:0070925 P organelle assembly GO:1902685 P positive regulation of receptor localization to synapse GO:1903076 P regulation of protein localization to plasma membrane
566	O_BomoMSG1050_internal:A_BomoMSG_c4883_g1_i1 168bp	Bomo_Chr7	PREDICTED:_uncharacterized_protein_LOC106129371_[Amyelois_transitella]
567	O_BomoMSG10510_5prime_partial:A_BomoMSG_c22731_g1_i3 116bp	Bomo_Chr1	syntaxin-7_[Bombyx_mori]	GO:0000149 F SNARE binding GO:0001772 C immunological synapse GO:0001916 P positive regulation of T cell mediated cytotoxicity GO:0005484 F SNAP receptor activity GO:0005515 F protein binding GO:0005764 C lysosome GO:0005765 C lysosomal membrane GO:0005768 C endosome GO:0005769 C early endosome GO:0005770 C late endosome GO:0005886 C plasma membrane GO:0006886 P intracellular protein transport GO:0006906 P vesicle fusion GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016192 P vesicle-mediated transport GO:0019869 F chloride channel inhibitor activity GO:0019905 F syntaxin binding GO:0030139 C endocytic vesicle GO:0031201 C SNARE complex GO:0031901 C early endosome membrane GO:0031982 C vesicle GO:0042582 C azurophil granule GO:0043231 C intracellular membrane-bounded organelle GO:0048278 P vesicle docking GO:0048471 C perinuclear region of cytoplasm GO:0051640 P organelle localization GO:0055037 C recycling endosome GO:0070062 C extracellular exosome GO:0070820 C tertiary granule GO:0070925 P organelle assembly GO:1902685 P positive regulation of receptor localization to synapse GO:1903076 P regulation of protein localization to plasma membrane
568	O_BomoMSG10511_internal:A_BomoMSG_c22733_g1_i1 258bp	Bomo_Chr19	follistatin-A_[Bombyx_mori]	GO:0005576 C extracellular region GO:0007275 P multicellular organism development GO:0009953 P dorsal/ventral pattern formation GO:0009994 P oocyte differentiation GO:0030901 P midbrain development GO:0043049 P otic placode formation GO:0048263 P determination of dorsal identity GO:0048703 P embryonic viscerocranium morphogenesis
569	O_BomoMSG10512_5prime_partial:A_BomoMSG_c22733_g1_i1 111bp	Bomo_Chr19
570	O_BomoMSG10513_3prime_partial:A_BomoMSG_c22733_g1_i1 101bp	Bomo_Chr19