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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomoMSG10460_internal:A_BomoMSG_c22698_g2_i4
147bp
 alpha-N-acetylgalactosaminidase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004557 F alpha-galactosidase activity
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0009505 C plant-type cell wall
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0052692 F raffinose alpha-galactosidase activity
512 O_BomoMSG10461_5prime_partial:A_BomoMSG_c22704_g1_i2
133bp
 dynactin_subunit_2_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030286 C dynein complex
GO:0031982 C vesicle
513 O_BomoMSG10462_5prime_partial:A_BomoMSG_c22705_g1_i1
111bp
 histone_acetyltransferase_KAT2A_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000125 C SAGA complex
GO:0000776 C kinetochore
GO:0000790 C chromatin
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0004468 F lysine N-acetyltransferase activity, acting on acetyl phosphate as donor
GO:0004861 F cyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006473 P protein acetylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007219 P Notch signaling pathway
GO:0007613 P memory
GO:0008080 F N-acetyltransferase activity
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010835 P regulation of protein ADP-ribosylation
GO:0010976 P positive regulation of neuron projection development
GO:0016032 P viral process
GO:0016407 F acetyltransferase activity
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018076 P N-terminal peptidyl-lysine acetylation
GO:0018393 P internal peptidyl-lysine acetylation
GO:0018394 P peptidyl-lysine acetylation
GO:0019901 F protein kinase binding
GO:0031672 C A band
GO:0031674 C I band
GO:0032403 F protein-containing complex binding
GO:0032869 P cellular response to insulin stimulus
GO:0034599 P cellular response to oxidative stress
GO:0035035 F histone acetyltransferase binding
GO:0035563 P positive regulation of chromatin binding
GO:0035948 P obsolete positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter
GO:0042641 C actomyosin
GO:0042826 F histone deacetylase binding
GO:0043966 P histone H3 acetylation
GO:0043970 P histone H3-K9 acetylation
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045909 P vasodilation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048511 P rhythmic process
GO:0071374 P cellular response to parathyroid hormone stimulus
GO:0071442 P positive regulation of histone H3-K14 acetylation
GO:2000617 P positive regulation of histone H3-K9 acetylation
514 O_BomoMSG10463_internal:A_BomoMSG_c22707_g1_i1
424bp
 survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
515 O_BomoMSG10464_complete:A_BomoMSG_c22707_g1_i1
152bp
516 O_BomoMSG10465_internal:A_BomoMSG_c22707_g1_i2
390bp
 survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
517 O_BomoMSG10466_complete:A_BomoMSG_c22707_g1_i2
152bp
518 O_BomoMSG10467_complete:A_BomoMSG_c22708_g1_i1
104bp
519 O_BomoMSG10468_complete:A_BomoMSG_c22708_g1_i1
104bp
520 O_BomoMSG10469_complete:A_BomoMSG_c22708_g1_i2
106bp
521 O_BomoMSG1046_internal:A_BomoMSG_c4868_g1_i1
202bp
 thyroid_adenoma-associated_protein_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
522 O_BomoMSG10470_complete:A_BomoMSG_c22708_g1_i2
104bp
523 O_BomoMSG10471_5prime_partial:A_BomoMSG_c22709_g1_i1
375bp
 LOW_QUALITY_PROTEIN:_GPI_mannosyltransferase_3_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097502 P mannosylation
524 O_BomoMSG10472_complete:A_BomoMSG_c22709_g1_i1
157bp
525 O_BomoMSG10473_complete:A_BomoMSG_c22709_g1_i1
142bp
526 O_BomoMSG10474_internal:A_BomoMSG_c22710_g1_i1
251bp
 E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007423 P sensory organ development
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045179 C apical cortex
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0061630 F ubiquitin protein ligase activity
527 O_BomoMSG10475_complete:A_BomoMSG_c22710_g1_i1
193bp
528 O_BomoMSG10476_internal:A_BomoMSG_c22710_g1_i2
466bp
 E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
529 O_BomoMSG10477_complete:A_BomoMSG_c22710_g1_i2
193bp
530 O_BomoMSG10478_3prime_partial:A_BomoMSG_c22711_g1_i1
183bp
 E3_SUMO-protein_ligase_RanBP2_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005737 C cytoplasm
GO:0046907 P intracellular transport
531 O_BomoMSG10479_complete:A_BomoMSG_c22716_g2_i1
101bp
 N-acetylneuraminate_lyase_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008747 F N-acetylneuraminate lyase activity
GO:0016829 F lyase activity
GO:0019262 P N-acetylneuraminate catabolic process
532 O_BomoMSG1047_5prime_partial:A_BomoMSG_c4868_g1_i1
166bp
533 O_BomoMSG10480_complete:A_BomoMSG_c22716_g2_i2
303bp
 N-acetylneuraminate_lyase_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0008747 F N-acetylneuraminate lyase activity
GO:0016829 F lyase activity
GO:0019262 P N-acetylneuraminate catabolic process
534 O_BomoMSG10481_internal:A_BomoMSG_c22717_g2_i1
293bp
 uncharacterized_protein_LOC101743995_[Bombyx_mori]
535 O_BomoMSG10482_3prime_partial:A_BomoMSG_c22718_g1_i1
358bp
 F-box/LRR-repeat_protein_16_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
536 O_BomoMSG10483_complete:A_BomoMSG_c22718_g1_i1
111bp
537 O_BomoMSG10484_internal:A_BomoMSG_c22718_g1_i2
301bp
 F-box/LRR-repeat_protein_16_[Bombyx_mori]
GO:0005737 C cytoplasm
538 O_BomoMSG10485_complete:A_BomoMSG_c22718_g1_i2
111bp
539 O_BomoMSG10486_internal:A_BomoMSG_c22718_g1_i3
138bp
 PREDICTED:_F-box/LRR-repeat_protein_16,_partial_[Plutella_xylostella]
GO:0005737 C cytoplasm
540 O_BomoMSG10487_complete:A_BomoMSG_c22718_g1_i3
111bp
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