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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
571 O_BomoMSG10514_complete:A_BomoMSG_c22734_g1_i1
552bp
 sensory_neuron_membrane_protein_2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
572 O_BomoMSG10515_5prime_partial:A_BomoMSG_c22734_g1_i1
112bp
573 O_BomoMSG10516_complete:A_BomoMSG_c22734_g1_i2
521bp
 sensory_neuron_membrane_protein_2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
574 O_BomoMSG10517_5prime_partial:A_BomoMSG_c22734_g1_i2
112bp
575 O_BomoMSG10518_complete:A_BomoMSG_c22734_g1_i3
521bp
 sensory_neuron_membrane_protein_2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
576 O_BomoMSG10519_5prime_partial:A_BomoMSG_c22734_g1_i3
112bp
577 O_BomoMSG1051_internal:A_BomoMSG_c4906_g1_i1
155bp
 cadherin-87A_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0046872 F metal ion binding
578 O_BomoMSG10520_5prime_partial:A_BomoMSG_c22734_g1_i4
330bp
 sensory_neuron_membrane_protein_2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
579 O_BomoMSG10521_5prime_partial:A_BomoMSG_c22734_g1_i4
112bp
580 O_BomoMSG10522_complete:A_BomoMSG_c22734_g1_i5
521bp
 sensory_neuron_membrane_protein_2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050896 P response to stimulus
581 O_BomoMSG10523_5prime_partial:A_BomoMSG_c22734_g1_i5
112bp
582 O_BomoMSG10524_3prime_partial:A_BomoMSG_c22735_g1_i1
251bp
 3-hydroxyacyl-CoA_dehydrogenase_type-2_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0008033 P tRNA processing
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008205 P ecdysone metabolic process
GO:0008209 P androgen metabolic process
GO:0008210 P estrogen metabolic process
GO:0016229 F steroid dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0018454 F acetoacetyl-CoA reductase activity
GO:0030283 F testosterone dehydrogenase [NAD(P)] activity
GO:0047015 F 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
GO:0047022 F 7-beta-hydroxysteroid dehydrogenase (NADP+) activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
583 O_BomoMSG10525_internal:A_BomoMSG_c22735_g1_i2
107bp
 3-hydroxyacyl-CoA_dehydrogenase_type-2_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0008033 P tRNA processing
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030283 F testosterone dehydrogenase [NAD(P)] activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0047015 F 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
584 O_BomoMSG10526_5prime_partial:A_BomoMSG_c22737_g1_i1
194bp
 gamma-taxilin_[Bombyx_mori]
585 O_BomoMSG10527_internal:A_BomoMSG_c22739_g1_i1
321bp
 signal-induced_proliferation-associated_1-like_protein_2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0031532 P actin cytoskeleton reorganization
GO:0043005 C neuron projection
GO:0043087 P regulation of GTPase activity
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0048167 P regulation of synaptic plasticity
GO:0048814 P regulation of dendrite morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0090630 P activation of GTPase activity
586 O_BomoMSG10528_internal:A_BomoMSG_c22739_g1_i2
414bp
 signal-induced_proliferation-associated_1-like_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005096 F GTPase activator activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
587 O_BomoMSG10529_internal:A_BomoMSG_c22742_g1_i1
279bp
 WD_repeat-containing_protein_19_isoform_X2_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
588 O_BomoMSG1052_3prime_partial:A_BomoMSG_c4936_g1_i1
130bp
 PREDICTED:_structure-specific_endonuclease_subunit_SLX4_[Papilio_xuthus]
589 O_BomoMSG10530_5prime_partial:A_BomoMSG_c22743_g1_i1
231bp
 protein_cappuccino_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007315 P pole plasm assembly
GO:0007316 P pole plasm RNA localization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030029 P actin filament-based process
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045010 P actin nucleation
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
590 O_BomoMSG10531_complete:A_BomoMSG_c22745_g1_i1
461bp
 transcriptional_adaptor_3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
591 O_BomoMSG10532_internal:A_BomoMSG_c22747_g1_i1
361bp
 E3_ubiquitin-protein_ligase_TRAIP_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0032688 P negative regulation of interferon-beta production
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0061630 F ubiquitin protein ligase activity
592 O_BomoMSG10533_complete:A_BomoMSG_c22747_g1_i1
105bp
593 O_BomoMSG10534_5prime_partial:A_BomoMSG_c22747_g1_i1
100bp
594 O_BomoMSG10535_internal:A_BomoMSG_c22750_g1_i2
116bp
595 O_BomoMSG10536_internal:A_BomoMSG_c22750_g1_i2
116bp
 actin_cytoskeleton-regulatory_complex_protein_pan-1-like_[Bombyx_mori]
596 O_BomoMSG10537_internal:A_BomoMSG_c22750_g1_i2
116bp
597 O_BomoMSG10538_5prime_partial:A_BomoMSG_c22752_g1_i1
336bp
 peptidylglycine_alpha-hydroxylating_monooxygenase_[Bombyx_mori]
GO:0001519 P peptide amidation
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006518 P peptide metabolic process
GO:0007613 P memory
GO:0009620 P response to fungus
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0032504 P multicellular organism reproduction
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
598 O_BomoMSG10539_complete:A_BomoMSG_c22752_g1_i1
185bp
599 O_BomoMSG1053_complete:A_BomoMSG_c4945_g1_i1
533bp
 EH_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0010886 P positive regulation of cholesterol storage
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0020018 C ciliary pocket membrane
GO:0030030 P cell projection organization
GO:0030139 C endocytic vesicle
GO:0031095 C platelet dense tubular network membrane
GO:0031175 P neuron projection development
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0034383 P low-density lipoprotein particle clearance
GO:0042384 P cilium assembly
GO:0042632 P cholesterol homeostasis
GO:0042995 C cell projection
GO:0043209 C myelin sheath
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055038 C recycling endosome membrane
GO:0060170 C ciliary membrane
GO:0061512 P protein localization to cilium
GO:1901741 P positive regulation of myoblast fusion
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2001137 P positive regulation of endocytic recycling
600 O_BomoMSG10540_5prime_partial:A_BomoMSG_c22752_g1_i2
295bp
 peptidylglycine_alpha-hydroxylating_monooxygenase_[Bombyx_mori]
GO:0001519 P peptide amidation
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006518 P peptide metabolic process
GO:0007613 P memory
GO:0009620 P response to fungus
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0032504 P multicellular organism reproduction
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
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