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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5341 O_BomoMSG14808_5prime_partial:A_BomoMSG_c24942_g1_i3
230bp
5342 O_BomoMSG14809_3prime_partial:A_BomoMSG_c24942_g1_i3
189bp
 adenylyl_cyclase-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003779 F actin binding
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030036 P actin cytoskeleton organization
5343 O_BomoMSG1480_3prime_partial:A_BomoMSG_c7277_g1_i1
108bp
 proteasome_assembly_chaperone_2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0043248 P proteasome assembly
5344 O_BomoMSG14810_5prime_partial:A_BomoMSG_c24943_g1_i1
129bp
 zinc_finger_MIZ_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
5345 O_BomoMSG14811_complete:A_BomoMSG_c24943_g1_i2
807bp
 zinc_finger_MIZ_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0001570 P vasculogenesis
GO:0001701 P in utero embryonic development
GO:0003007 P heart morphogenesis
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007296 P vitellogenesis
GO:0007569 P cell aging
GO:0008270 F zinc ion binding
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048146 P positive regulation of fibroblast proliferation
GO:0048589 P developmental growth
GO:0048844 P artery morphogenesis
5346 O_BomoMSG14812_complete:A_BomoMSG_c24943_g1_i2
144bp
5347 O_BomoMSG14813_complete:A_BomoMSG_c24943_g1_i2
116bp
5348 O_BomoMSG14814_complete:A_BomoMSG_c24943_g1_i2
102bp
5349 O_BomoMSG14815_complete:A_BomoMSG_c24944_g2_i1
126bp
 Uncharacterized_protein_APZ42_028919_[Daphnia_magna]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5350 O_BomoMSG14816_complete:A_BomoMSG_c24944_g2_i2
109bp
 Uncharacterized_protein_APZ42_028919_[Daphnia_magna]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5351 O_BomoMSG14817_complete:A_BomoMSG_c24944_g2_i3
103bp
 uncharacterized_protein_LOC105842894_[Bombyx_mori]
5352 O_BomoMSG14818_internal:A_BomoMSG_c24945_g1_i1
478bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
5353 O_BomoMSG14819_3prime_partial:A_BomoMSG_c24946_g1_i1
275bp
 zinc_finger_protein_62_homolog_isoform_X1_[Helicoverpa_armigera]
5354 O_BomoMSG1481_3prime_partial:A_BomoMSG_c7278_g1_i1
106bp
 Cullin-associated_NEDD8-dissociated_protein_1_[Papilio_xuthus]
GO:0000151 C ubiquitin ligase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010265 P SCF complex assembly
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0017025 F TBP-class protein binding
GO:0030154 P cell differentiation
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0043086 P negative regulation of catalytic activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
5355 O_BomoMSG14820_3prime_partial:A_BomoMSG_c24946_g1_i2
210bp
 zinc_finger_protein_93-like_[Bombyx_mori]
5356 O_BomoMSG14821_internal:A_BomoMSG_c24946_g1_i3
103bp
 PREDICTED:_zinc_finger_protein_26-like_isoform_X2_[Amyelois_transitella]
5357 O_BomoMSG14822_internal:A_BomoMSG_c24946_g1_i5
111bp
 zinc_finger_protein_93-like_[Bombyx_mori]
5358 O_BomoMSG14823_3prime_partial:A_BomoMSG_c24946_g1_i6
205bp
 zinc_finger_protein_93-like_[Bombyx_mori]
5359 O_BomoMSG14824_3prime_partial:A_BomoMSG_c24946_g1_i7
288bp
 zinc_finger_protein_93-like_[Bombyx_mori]
5360 O_BomoMSG14825_5prime_partial:A_BomoMSG_c24946_g1_i7
111bp
5361 O_BomoMSG14826_internal:A_BomoMSG_c24948_g1_i1
302bp
 uncharacterized_protein_LOC101741630_isoform_X2_[Bombyx_mori]
5362 O_BomoMSG14827_3prime_partial:A_BomoMSG_c24948_g1_i2
301bp
 uncharacterized_protein_LOC101741630_isoform_X2_[Bombyx_mori]
5363 O_BomoMSG14828_3prime_partial:A_BomoMSG_c24948_g1_i3
296bp
 uncharacterized_protein_LOC101741630_isoform_X4_[Bombyx_mori]
5364 O_BomoMSG14829_3prime_partial:A_BomoMSG_c24949_g1_i1
205bp
 myeloid_leukemia_factor_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:2000495 P regulation of cell proliferation involved in compound eye morphogenesis
5365 O_BomoMSG1482_internal:A_BomoMSG_c7294_g1_i1
130bp
 mitogen-activated_protein_kinase_kinase_kinase_10_[Bombyx_mori]
5366 O_BomoMSG14830_5prime_partial:A_BomoMSG_c24949_g1_i1
181bp
5367 O_BomoMSG14831_internal:A_BomoMSG_c24949_g1_i2
186bp
 myeloid_leukemia_factor_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:2000495 P regulation of cell proliferation involved in compound eye morphogenesis
5368 O_BomoMSG14832_5prime_partial:A_BomoMSG_c24949_g1_i2
181bp
5369 O_BomoMSG14833_internal:A_BomoMSG_c24950_g1_i1
324bp
 cohesin_subunit_SA-2_isoform_X2_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0016925 P protein sumoylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
5370 O_BomoMSG14834_3prime_partial:A_BomoMSG_c24951_g1_i1
307bp
 verprolin_isoform_X3_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0045844 P positive regulation of striated muscle tissue development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051145 P smooth muscle cell differentiation
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