SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/29137
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5311 O_BomoMSG14781_3prime_partial:A_BomoMSG_c24932_g1_i1
215bp
 ribosome_biogenesis_protein_TSR3_homolog_[Bombyx_mori]
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0042254 P ribosome biogenesis
5312 O_BomoMSG14782_internal:A_BomoMSG_c24933_g1_i1
243bp
 exocyst_complex_component_2_[Bombyx_mori]
GO:0000145 C exocyst
GO:0000281 P mitotic cytokinesis
GO:0005642 C annulate lamellae
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006893 P Golgi to plasma membrane transport
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0010629 P negative regulation of gene expression
GO:0015031 P protein transport
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030136 C clathrin-coated vesicle
GO:0032456 P endocytic recycling
GO:0035003 C subapical complex
GO:0035147 P branch fusion, open tracheal system
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045056 P transcytosis
GO:0045087 P innate immune response
GO:0048215 P positive regulation of Golgi vesicle fusion to target membrane
GO:0048599 P oocyte development
GO:0055037 C recycling endosome
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
GO:0072697 P protein localization to cell cortex
GO:0098793 C presynapse
5313 O_BomoMSG14783_3prime_partial:A_BomoMSG_c24933_g1_i2
416bp
 exocyst_complex_component_2_[Bombyx_mori]
GO:0000145 C exocyst
GO:0000281 P mitotic cytokinesis
GO:0005642 C annulate lamellae
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006893 P Golgi to plasma membrane transport
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0010629 P negative regulation of gene expression
GO:0015031 P protein transport
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030136 C clathrin-coated vesicle
GO:0032456 P endocytic recycling
GO:0035003 C subapical complex
GO:0035147 P branch fusion, open tracheal system
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045056 P transcytosis
GO:0045087 P innate immune response
GO:0048215 P positive regulation of Golgi vesicle fusion to target membrane
GO:0048599 P oocyte development
GO:0055037 C recycling endosome
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
GO:0072697 P protein localization to cell cortex
GO:0098793 C presynapse
5314 O_BomoMSG14784_5prime_partial:A_BomoMSG_c24935_g1_i1
234bp
 uncharacterized_protein_LOC101740589_[Bombyx_mori]
5315 O_BomoMSG14785_3prime_partial:A_BomoMSG_c24936_g1_i1
239bp
 uncharacterized_protein_LOC101737259_isoform_X1_[Bombyx_mori]
5316 O_BomoMSG14786_5prime_partial:A_BomoMSG_c24936_g1_i1
154bp
5317 O_BomoMSG14787_5prime_partial:A_BomoMSG_c24937_g1_i1
430bp
 transmembrane_protein_184C_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5318 O_BomoMSG14788_5prime_partial:A_BomoMSG_c24937_g1_i2
143bp
 transmembrane_protein_184C_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5319 O_BomoMSG14789_complete:A_BomoMSG_c24938_g3_i1
107bp
 thioredoxin-like_protein_[Bombyx_mori]
GO:0005623 C obsolete cell
GO:0006662 P glycerol ether metabolic process
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
5320 O_BomoMSG1478_internal:A_BomoMSG_c7268_g1_i1
116bp
 clustered_mitochondria_protein_homolog_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007005 P mitochondrion organization
GO:0048312 P intracellular distribution of mitochondria
5321 O_BomoMSG14790_5prime_partial:A_BomoMSG_c24938_g3_i1
100bp
5322 O_BomoMSG14791_complete:A_BomoMSG_c24938_g5_i2
242bp
 glutamate_receptor_ionotropic,_delta-1-like_[Bombyx_mori]
GO:0001966 P thigmotaxis
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0004971 F AMPA glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006972 P hyperosmotic response
GO:0007614 P short-term memory
GO:0007631 P feeding behavior
GO:0008306 P associative learning
GO:0008328 C ionotropic glutamate receptor complex
GO:0008344 P adult locomotory behavior
GO:0009612 P response to mechanical stimulus
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032589 C neuron projection membrane
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0035249 P synaptic transmission, glutamatergic
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043056 P forward locomotion
GO:0043058 P regulation of backward locomotion
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046959 P habituation
GO:0050913 P sensory perception of bitter taste
GO:0055037 C recycling endosome
GO:0097038 C perinuclear endoplasmic reticulum
5323 O_BomoMSG14792_complete:A_BomoMSG_c24938_g5_i2
112bp
 PREDICTED:_uncharacterized_protein_LOC105562616_[Vollenhovia_emeryi]
5324 O_BomoMSG14793_complete:A_BomoMSG_c24938_g5_i3
242bp
 glutamate_receptor_ionotropic,_delta-1-like_[Bombyx_mori]
GO:0001966 P thigmotaxis
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0004971 F AMPA glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006972 P hyperosmotic response
GO:0007614 P short-term memory
GO:0007631 P feeding behavior
GO:0008306 P associative learning
GO:0008328 C ionotropic glutamate receptor complex
GO:0008344 P adult locomotory behavior
GO:0009612 P response to mechanical stimulus
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032589 C neuron projection membrane
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0035249 P synaptic transmission, glutamatergic
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043056 P forward locomotion
GO:0043058 P regulation of backward locomotion
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046959 P habituation
GO:0050913 P sensory perception of bitter taste
GO:0055037 C recycling endosome
GO:0097038 C perinuclear endoplasmic reticulum
5325 O_BomoMSG14794_complete:A_BomoMSG_c24938_g5_i3
112bp
 PREDICTED:_uncharacterized_protein_LOC105562616_[Vollenhovia_emeryi]
5326 O_BomoMSG14795_complete:A_BomoMSG_c24938_g5_i5
242bp
 glutamate_receptor_ionotropic,_delta-1-like_[Bombyx_mori]
GO:0001966 P thigmotaxis
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0004971 F AMPA glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006972 P hyperosmotic response
GO:0007614 P short-term memory
GO:0007631 P feeding behavior
GO:0008306 P associative learning
GO:0008328 C ionotropic glutamate receptor complex
GO:0008344 P adult locomotory behavior
GO:0009612 P response to mechanical stimulus
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0032589 C neuron projection membrane
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0035249 P synaptic transmission, glutamatergic
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043056 P forward locomotion
GO:0043058 P regulation of backward locomotion
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046959 P habituation
GO:0050913 P sensory perception of bitter taste
GO:0055037 C recycling endosome
GO:0097038 C perinuclear endoplasmic reticulum
5327 O_BomoMSG14796_complete:A_BomoMSG_c24938_g5_i5
112bp
 PREDICTED:_uncharacterized_protein_LOC105562616_[Vollenhovia_emeryi]
5328 O_BomoMSG14797_5prime_partial:A_BomoMSG_c24938_g6_i1
232bp
 glutamate_receptor_ionotropic,_kainate_2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0004970 F ionotropic glutamate receptor activity
GO:0005216 F ion channel activity
GO:0005234 F extracellularly glutamate-gated ion channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0034220 P ion transmembrane transport
GO:0035235 P ionotropic glutamate receptor signaling pathway
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
5329 O_BomoMSG14798_complete:A_BomoMSG_c24938_g3_i2
107bp
 thioredoxin-like_protein_[Bombyx_mori]
GO:0005623 C obsolete cell
GO:0006662 P glycerol ether metabolic process
GO:0015035 F protein-disulfide reductase activity
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
5330 O_BomoMSG14799_complete:A_BomoMSG_c24939_g1_i1
219bp
 uncharacterized_protein_LOC101739791_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
5331 O_BomoMSG1479_internal:A_BomoMSG_c7268_g1_i1
116bp
5332 O_BomoMSG147_3prime_partial:A_BomoMSG_c546_g1_i1
103bp
 zinc_finger_protein_836_[Bombyx_mori]
5333 O_BomoMSG14800_5prime_partial:A_BomoMSG_c24940_g1_i1
108bp
5334 O_BomoMSG14801_5prime_partial:A_BomoMSG_c24940_g1_i2
173bp
5335 O_BomoMSG14802_3prime_partial:A_BomoMSG_c24940_g1_i2
169bp
 ankyrin_repeat_domain-containing_protein_29_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
5336 O_BomoMSG14803_5prime_partial:A_BomoMSG_c24940_g1_i2
136bp
 hypothetical_protein_OIDMADRAFT_73723,_partial_[Oidiodendron_maius_Zn]
5337 O_BomoMSG14804_3prime_partial:A_BomoMSG_c24941_g1_i1
498bp
 nuclear_pore_complex_protein_Nup85_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051028 P mRNA transport
5338 O_BomoMSG14805_internal:A_BomoMSG_c24941_g1_i2
184bp
 nuclear_pore_complex_protein_Nup85_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006935 P chemotaxis
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0030032 P lamellipodium assembly
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048246 P macrophage chemotaxis
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
5339 O_BomoMSG14806_internal:A_BomoMSG_c24942_g1_i2
280bp
 adenylyl_cyclase-associated_protein_1_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001667 P ameboidal-type cell migration
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006898 P receptor-mediated endocytosis
GO:0007010 P cytoskeleton organization
GO:0007163 P establishment or maintenance of cell polarity
GO:0007165 P signal transduction
GO:0007190 P activation of adenylate cyclase activity
GO:0016020 C membrane
GO:0030036 P actin cytoskeleton organization
GO:0030864 C cortical actin cytoskeleton
GO:0070062 C extracellular exosome
5340 O_BomoMSG14807_5prime_partial:A_BomoMSG_c24942_g1_i2
230bp
previous next from show/29137

- SilkBase 1999-2023 -