Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
4711	O_BomoMSG14240_complete:A_BomoMSG_c24721_g7_i1 217bp	Bomo_Chr19	glutathione_S-transferase_1,_isoform_C-like_[Bombyx_mori]	GO:0004364 F glutathione transferase activity GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016829 F lyase activity GO:0018833 F DDT-dehydrochlorinase activity
4712	O_BomoMSG14241_complete:A_BomoMSG_c24721_g7_i2 217bp	Bomo_Chr19	glutathione_S-transferase_1,_isoform_C-like_[Bombyx_mori]	GO:0004364 F glutathione transferase activity GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016829 F lyase activity GO:0018833 F DDT-dehydrochlorinase activity
4713	O_BomoMSG14242_complete:A_BomoMSG_c24722_g1_i2 236bp	Bomo_Chr16	uncharacterized_protein_LOC101740292_[Bombyx_mori]
4714	O_BomoMSG14243_complete:A_BomoMSG_c24722_g1_i2 114bp	Bomo_Chr16
4715	O_BomoMSG14244_internal:A_BomoMSG_c24724_g1_i1 235bp	Bomo_Chr10	eIF-2-alpha_kinase_activator_GCN1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005844 C polysome GO:0006417 P regulation of translation GO:0016020 C membrane GO:0019887 F protein kinase regulator activity GO:0019901 F protein kinase binding GO:0033554 P cellular response to stress GO:0033674 P positive regulation of kinase activity GO:0034198 P cellular response to amino acid starvation GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress GO:0043022 F ribosome binding GO:0044822 F RNA binding GO:0045859 P regulation of protein kinase activity GO:1990253 P cellular response to leucine starvation
4716	O_BomoMSG14245_5prime_partial:A_BomoMSG_c24724_g1_i1 186bp	Bomo_Chr10
4717	O_BomoMSG14246_5prime_partial:A_BomoMSG_c24724_g1_i1 158bp	Bomo_Chr10
4718	O_BomoMSG14247_internal:A_BomoMSG_c24724_g1_i2 160bp	Bomo_Chr10
4719	O_BomoMSG14248_internal:A_BomoMSG_c24724_g1_i2 159bp	Bomo_Chr10	eIF-2-alpha_kinase_activator_GCN1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005840 C ribosome GO:0005844 C polysome GO:0006412 P translation GO:0006417 P regulation of translation GO:0008135 F translation factor activity, RNA binding GO:0016020 C membrane GO:0019887 F protein kinase regulator activity GO:0019901 F protein kinase binding GO:0033554 P cellular response to stress GO:0033674 P positive regulation of kinase activity GO:0034198 P cellular response to amino acid starvation GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress GO:0043022 F ribosome binding GO:0044822 F RNA binding GO:0045859 P regulation of protein kinase activity GO:1990253 P cellular response to leucine starvation
4720	O_BomoMSG14249_internal:A_BomoMSG_c24724_g1_i2 159bp	Bomo_Chr10
4721	O_BomoMSG1424_internal:A_BomoMSG_c6824_g1_i1 156bp	Bomo_Chr8	LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]	GO:0003779 F actin binding GO:0005200 F structural constituent of cytoskeleton GO:0005515 F protein binding GO:0005543 F phospholipid binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005794 C Golgi apparatus GO:0005856 C cytoskeleton GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006897 P endocytosis GO:0006915 P apoptotic process GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process GO:0012505 C endomembrane system GO:0016020 C membrane GO:0030136 C clathrin-coated vesicle GO:0030154 P cell differentiation GO:0030276 F clathrin binding GO:0030665 C clathrin-coated vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0035091 F phosphatidylinositol binding GO:0042981 P regulation of apoptotic process GO:0043231 C intracellular membrane-bounded organelle GO:0048260 P positive regulation of receptor-mediated endocytosis GO:0048268 P clathrin coat assembly GO:0072583 P clathrin-dependent endocytosis GO:0097190 P apoptotic signaling pathway
4722	O_BomoMSG14250_3prime_partial:A_BomoMSG_c24724_g1_i3 447bp	Bomo_Chr10	eIF-2-alpha_kinase_activator_GCN1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005844 C polysome GO:0006417 P regulation of translation GO:0016020 C membrane GO:0019887 F protein kinase regulator activity GO:0019901 F protein kinase binding GO:0033554 P cellular response to stress GO:0033674 P positive regulation of kinase activity GO:0034198 P cellular response to amino acid starvation GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress GO:0043022 F ribosome binding GO:0044822 F RNA binding GO:0045859 P regulation of protein kinase activity GO:1990253 P cellular response to leucine starvation
4723	O_BomoMSG14251_5prime_partial:A_BomoMSG_c24724_g1_i3 186bp	Bomo_Chr10
4724	O_BomoMSG14252_5prime_partial:A_BomoMSG_c24724_g1_i3 158bp	Bomo_Chr10
4725	O_BomoMSG14253_complete:A_BomoMSG_c24725_g1_i1 487bp	Bomo_Chr11	UDP-N-acetylhexosamine_pyrophosphorylase-like_protein_1_[Bombyx_mori]	GO:0003977 F UDP-N-acetylglucosamine diphosphorylase activity GO:0005829 C cytosol GO:0006048 P UDP-N-acetylglucosamine biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0070569 F uridylyltransferase activity
4726	O_BomoMSG14254_5prime_partial:A_BomoMSG_c24726_g1_i1 147bp	Bomo_Chr9	major_facilitator_superfamily_domain-containing_protein_9-like_[Bombyx_mori]
4727	O_BomoMSG14255_5prime_partial:A_BomoMSG_c24726_g1_i2 296bp	Bomo_Chr9	major_facilitator_superfamily_domain-containing_protein_9-like_[Bombyx_mori]	GO:0005215 F transporter activity GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0055085 P transmembrane transport
4728	O_BomoMSG14256_5prime_partial:A_BomoMSG_c24726_g1_i3 171bp	Bomo_Chr9	major_facilitator_superfamily_domain-containing_protein_9-like_[Bombyx_mori]	GO:0005215 F transporter activity GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0055085 P transmembrane transport
4729	O_BomoMSG14257_3prime_partial:A_BomoMSG_c24727_g1_i2 282bp	Bomo_Chr14	DNA-directed_RNA_polymerase_III_subunit_RPC3_isoform_X2_[Bombyx_mori]	GO:0001056 F RNA polymerase III activity GO:0002376 P immune system process GO:0003677 F DNA binding GO:0003899 F DNA-directed 5'-3' RNA polymerase activity GO:0005634 C nucleus GO:0005666 C RNA polymerase III complex GO:0006351 P transcription, DNA-templated GO:0006383 P transcription by RNA polymerase III GO:0032728 P positive regulation of interferon-beta production GO:0045087 P innate immune response GO:0045089 P positive regulation of innate immune response GO:0051607 P defense response to virus
4730	O_BomoMSG14258_3prime_partial:A_BomoMSG_c24727_g1_i3 305bp	Bomo_Chr14	DNA-directed_RNA_polymerase_III_subunit_RPC3_isoform_X1_[Bombyx_mori]	GO:0001056 F RNA polymerase III activity GO:0002376 P immune system process GO:0003677 F DNA binding GO:0003899 F DNA-directed 5'-3' RNA polymerase activity GO:0005634 C nucleus GO:0005666 C RNA polymerase III complex GO:0006351 P transcription, DNA-templated GO:0006383 P transcription by RNA polymerase III GO:0032728 P positive regulation of interferon-beta production GO:0045087 P innate immune response GO:0045089 P positive regulation of innate immune response GO:0051607 P defense response to virus
4731	O_BomoMSG14259_internal:A_BomoMSG_c24730_g1_i1 404bp	Bomo_Chr25	alpha-mannosidase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0003824 F catalytic activity GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004559 F alpha-mannosidase activity GO:0004572 F mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity GO:0005783 C endoplasmic reticulum GO:0005794 C Golgi apparatus GO:0005795 C Golgi stack GO:0005975 P carbohydrate metabolic process GO:0006013 P mannose metabolic process GO:0006486 P protein glycosylation GO:0006487 P protein N-linked glycosylation GO:0006491 P N-glycan processing GO:0006517 P protein deglycosylation GO:0008152 P metabolic process GO:0008270 F zinc ion binding GO:0015923 F mannosidase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016063 P rhodopsin biosynthetic process GO:0016787 F hydrolase activity GO:0016798 F hydrolase activity, acting on glycosyl bonds GO:0030246 F carbohydrate binding GO:0035010 P encapsulation of foreign target GO:0046872 F metal ion binding
4732	O_BomoMSG1425_5prime_partial:A_BomoMSG_c6832_g1_i1 111bp	Bomo_Chr19	DNA_repair_protein_RAD52_homolog_isoform_X3_[Bombyx_mori]
4733	O_BomoMSG14260_5prime_partial:A_BomoMSG_c24731_g1_i1 157bp	Bomo_Chr1
4734	O_BomoMSG14261_internal:A_BomoMSG_c24731_g1_i2 119bp	Bomo_Chr13	nascent_polypeptide-associated_complex_subunit_alpha,_muscle-specific_form,_partial_[Bombyx_mori]
4735	O_BomoMSG14262_internal:A_BomoMSG_c24731_g1_i2 119bp	Bomo_Chr13
4736	O_BomoMSG14263_internal:A_BomoMSG_c24731_g4_i1 104bp	Bomo_Scaf406
4737	O_BomoMSG14264_5prime_partial:A_BomoMSG_c24731_g4_i4 188bp	Bomo_Chr3
4738	O_BomoMSG14265_complete:A_BomoMSG_c24731_g4_i4 125bp	Bomo_Chr3
4739	O_BomoMSG14266_3prime_partial:A_BomoMSG_c24732_g1_i1 335bp	Bomo_Chr21	uncharacterized_protein_LOC101745487_[Bombyx_mori]
4740	O_BomoMSG14267_5prime_partial:A_BomoMSG_c24733_g3_i1 431bp	Bomo_Chr5	PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]	GO:0003964 F RNA-directed DNA polymerase activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity