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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4501 O_BomoMSG14051_5prime_partial:A_BomoMSG_c24628_g2_i1
145bp
4502 O_BomoMSG14052_complete:A_BomoMSG_c24628_g1_i2
181bp
 eukaryotic_translation_initiation_factor_2A_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0009967 P positive regulation of signal transduction
GO:0032933 P SREBP signaling pathway
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
GO:0072562 C blood microparticle
4503 O_BomoMSG14053_5prime_partial:A_BomoMSG_c24628_g2_i2
125bp
4504 O_BomoMSG14054_5prime_partial:A_BomoMSG_c24628_g2_i3
247bp
 eukaryotic_translation_initiation_factor_2A_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
4505 O_BomoMSG14055_complete:A_BomoMSG_c24629_g1_i1
186bp
 transmembrane_protein_186_[Helicoverpa_armigera]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4506 O_BomoMSG14056_complete:A_BomoMSG_c24631_g1_i1
323bp
 DNA_supercoiling_factor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0033018 C sarcoplasmic reticulum lumen
GO:0042470 C melanosome
GO:0046872 F metal ion binding
4507 O_BomoMSG14057_complete:A_BomoMSG_c24631_g1_i1
144bp
4508 O_BomoMSG14058_complete:A_BomoMSG_c24631_g1_i1
132bp
4509 O_BomoMSG14059_complete:A_BomoMSG_c24631_g1_i2
323bp
 DNA_supercoiling_factor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0033018 C sarcoplasmic reticulum lumen
GO:0042470 C melanosome
GO:0046872 F metal ion binding
4510 O_BomoMSG1405_3prime_partial:A_BomoMSG_c6614_g1_i1
224bp
 alpha_carbonic_anhydrase_8_[Bombyx_mori]
4511 O_BomoMSG14060_complete:A_BomoMSG_c24631_g1_i2
144bp
4512 O_BomoMSG14061_complete:A_BomoMSG_c24631_g1_i2
132bp
4513 O_BomoMSG14062_internal:A_BomoMSG_c24632_g1_i1
271bp
 PREDICTED:_nuclear_pore_complex_protein_Nup160_[Papilio_machaon]
4514 O_BomoMSG14063_3prime_partial:A_BomoMSG_c24632_g1_i1
192bp
4515 O_BomoMSG14064_internal:A_BomoMSG_c24632_g1_i3
308bp
 PREDICTED:_nuclear_pore_complex_protein_Nup160_[Papilio_machaon]
GO:0000724 P double-strand break repair via homologous recombination
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007184 P regulation of SMAD protein signal transduction
GO:0015031 P protein transport
GO:0031080 C nuclear pore outer ring
GO:0051028 P mRNA transport
4516 O_BomoMSG14065_complete:A_BomoMSG_c24632_g1_i3
203bp
4517 O_BomoMSG14066_complete:A_BomoMSG_c24633_g1_i1
308bp
 DTW_domain-containing_protein_1_[Bombyx_mori]
4518 O_BomoMSG14067_internal:A_BomoMSG_c24634_g2_i1
240bp
 solute_carrier_family_35_member_C2_[Bombyx_mori]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0010629 P negative regulation of gene expression
GO:0015786 P UDP-glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0045747 P positive regulation of Notch signaling pathway
4519 O_BomoMSG14068_3prime_partial:A_BomoMSG_c24635_g1_i1
508bp
 uncharacterized_protein_LOC101737598_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
4520 O_BomoMSG14069_3prime_partial:A_BomoMSG_c24635_g1_i2
610bp
 uncharacterized_protein_LOC101737598_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
4521 O_BomoMSG1406_complete:A_BomoMSG_c6614_g1_i1
158bp
4522 O_BomoMSG14070_complete:A_BomoMSG_c24636_g1_i2
292bp
 syntaxin-1A_isoform_X2_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
4523 O_BomoMSG14071_internal:A_BomoMSG_c24636_g1_i3
179bp
 syntaxin-1A_isoform_X8_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
4524 O_BomoMSG14072_internal:A_BomoMSG_c24636_g1_i4
170bp
 syntaxin-1A_isoform_X8_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
4525 O_BomoMSG14073_internal:A_BomoMSG_c24637_g1_i1
232bp
 RNA_polymerase-associated_protein_CTR9_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
4526 O_BomoMSG14074_3prime_partial:A_BomoMSG_c24637_g1_i2
722bp
 RNA_polymerase-associated_protein_CTR9_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
4527 O_BomoMSG14075_complete:A_BomoMSG_c24637_g1_i2
129bp
4528 O_BomoMSG14076_internal:A_BomoMSG_c24638_g1_i1
133bp
 dynamin_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001661 P conditioned taste aversion
GO:0001738 P morphogenesis of a polarized epithelium
GO:0003777 F microtubule motor activity
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007017 P microtubule-based process
GO:0007291 P sperm individualization
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0007612 P learning
GO:0007613 P memory
GO:0007614 P short-term memory
GO:0007637 P proboscis extension reflex
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008355 P olfactory learning
GO:0009408 P response to heat
GO:0016185 P synaptic vesicle budding from presynaptic endocytic zone membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030198 P extracellular matrix organization
GO:0030536 P larval feeding behavior
GO:0030707 P ovarian follicle cell development
GO:0030866 P cortical actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0034334 P adherens junction maintenance
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0036465 P synaptic vesicle recycling
GO:0040008 P regulation of growth
GO:0045202 C synapse
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046843 P dorsal appendage formation
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0048499 P synaptic vesicle membrane organization
GO:0050803 P regulation of synapse structure or activity
GO:0060429 P epithelium development
GO:0070864 C sperm individualization complex
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
GO:0072686 C mitotic spindle
GO:0090148 P membrane fission
GO:0098793 C presynapse
GO:1903475 P mitotic actomyosin contractile ring assembly
4529 O_BomoMSG14077_internal:A_BomoMSG_c24638_g1_i2
359bp
 dynamin_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001661 P conditioned taste aversion
GO:0001738 P morphogenesis of a polarized epithelium
GO:0003777 F microtubule motor activity
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007017 P microtubule-based process
GO:0007291 P sperm individualization
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0007612 P learning
GO:0007613 P memory
GO:0007614 P short-term memory
GO:0007637 P proboscis extension reflex
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0008355 P olfactory learning
GO:0009408 P response to heat
GO:0016185 P synaptic vesicle budding from presynaptic endocytic zone membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030198 P extracellular matrix organization
GO:0030536 P larval feeding behavior
GO:0030707 P ovarian follicle cell development
GO:0030866 P cortical actin cytoskeleton organization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0034334 P adherens junction maintenance
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0036465 P synaptic vesicle recycling
GO:0040008 P regulation of growth
GO:0045202 C synapse
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046843 P dorsal appendage formation
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0048499 P synaptic vesicle membrane organization
GO:0050803 P regulation of synapse structure or activity
GO:0060429 P epithelium development
GO:0070864 C sperm individualization complex
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
GO:0072686 C mitotic spindle
GO:0090148 P membrane fission
GO:0098793 C presynapse
GO:1903475 P mitotic actomyosin contractile ring assembly
4530 O_BomoMSG14078_3prime_partial:A_BomoMSG_c24640_g1_i1
280bp
 zinc_finger_protein_830_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016607 C nuclear speck
GO:0046872 F metal ion binding
GO:0051301 P cell division
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