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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4471 O_BomoMSG14024_complete:A_BomoMSG_c24612_g1_i2
398bp
 queuine_tRNA-ribosyltransferase_catalytic_subunit_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
4472 O_BomoMSG14025_complete:A_BomoMSG_c24612_g1_i2
110bp
4473 O_BomoMSG14026_complete:A_BomoMSG_c24612_g1_i3
297bp
 queuine_tRNA-ribosyltransferase_catalytic_subunit_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
4474 O_BomoMSG14027_complete:A_BomoMSG_c24612_g1_i3
110bp
4475 O_BomoMSG14028_complete:A_BomoMSG_c24614_g1_i1
370bp
 elongation_protein_4-like_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0008607 F phosphorylase kinase regulator activity
GO:0033588 C elongator holoenzyme complex
GO:0045859 P regulation of protein kinase activity
4476 O_BomoMSG14029_internal:A_BomoMSG_c24615_g1_i2
101bp
 myoneurin-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4477 O_BomoMSG1402_5prime_partial:A_BomoMSG_c6585_g1_i1
120bp
4478 O_BomoMSG14030_5prime_partial:A_BomoMSG_c24615_g2_i1
109bp
 zinc_finger_protein_28_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4479 O_BomoMSG14031_internal:A_BomoMSG_c24616_g1_i1
198bp
 DNA_polymerase_delta_subunit_2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043625 C delta DNA polymerase complex
GO:0071897 P DNA biosynthetic process
4480 O_BomoMSG14032_internal:A_BomoMSG_c24616_g1_i2
295bp
 DNA_polymerase_delta_subunit_2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043625 C delta DNA polymerase complex
GO:0071897 P DNA biosynthetic process
4481 O_BomoMSG14033_3prime_partial:A_BomoMSG_c24616_g2_i1
118bp
 DNA_polymerase_delta_subunit_2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
4482 O_BomoMSG14034_complete:A_BomoMSG_c24618_g1_i1
347bp
 SET_domain-containing_protein_4_[Bombyx_mori]
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0018026 P peptidyl-lysine monomethylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
4483 O_BomoMSG14035_internal:A_BomoMSG_c24620_g1_i1
195bp
 protein_lap4_isoform_X2_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001738 P morphogenesis of a polarized epithelium
GO:0005179 F hormone activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007464 P R3/R4 cell fate commitment
GO:0007472 P wing disc morphogenesis
GO:0007608 P sensory perception of smell
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008406 P gonad development
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0042048 P olfactory behavior
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042067 P establishment of ommatidial planar polarity
GO:0045169 C fusome
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045571 P negative regulation of imaginal disc growth
GO:0045823 P positive regulation of heart contraction
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048749 P compound eye development
GO:0048863 P stem cell differentiation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050803 P regulation of synapse structure or activity
GO:0050896 P response to stimulus
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0072002 P Malpighian tubule development
GO:0072089 P stem cell proliferation
4484 O_BomoMSG14036_internal:A_BomoMSG_c24620_g1_i2
103bp
 protein_lap4_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0001708 P cell fate specification
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0001738 P morphogenesis of a polarized epithelium
GO:0005179 F hormone activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007464 P R3/R4 cell fate commitment
GO:0007472 P wing disc morphogenesis
GO:0007608 P sensory perception of smell
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008406 P gonad development
GO:0008593 P regulation of Notch signaling pathway
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0042048 P olfactory behavior
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042067 P establishment of ommatidial planar polarity
GO:0045169 C fusome
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045571 P negative regulation of imaginal disc growth
GO:0045823 P positive regulation of heart contraction
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048749 P compound eye development
GO:0048863 P stem cell differentiation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050803 P regulation of synapse structure or activity
GO:0050896 P response to stimulus
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0072002 P Malpighian tubule development
GO:0072089 P stem cell proliferation
4485 O_BomoMSG14037_5prime_partial:A_BomoMSG_c24620_g1_i3
129bp
 uncharacterized_protein_LOC110380555_isoform_X10_[Helicoverpa_armigera]
4486 O_BomoMSG14038_3prime_partial:A_BomoMSG_c24621_g1_i1
339bp
 protein_ST7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4487 O_BomoMSG14039_complete:A_BomoMSG_c24621_g1_i1
187bp
4488 O_BomoMSG1403_internal:A_BomoMSG_c6590_g1_i1
243bp
 DE-cadherin_isoform_X4_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0001748 P insect visual primordium development
GO:0002009 P morphogenesis of an epithelium
GO:0003151 P outflow tract morphogenesis
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0005938 C cell cortex
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007370 P ventral furrow formation
GO:0007379 P segment specification
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007506 P gonadal mesoderm development
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0008105 P protein localization
GO:0008258 P head involution
GO:0008354 P germ cell migration
GO:0008356 P asymmetric cell division
GO:0008406 P gonad development
GO:0010004 P gastrulation involving germ band extension
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016337 P cell-cell adhesion
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016342 C catenin complex
GO:0017022 F myosin binding
GO:0030031 P cell projection assembly
GO:0030175 C filopodium
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035019 P somatic stem cell population maintenance
GO:0035099 P hemocyte migration
GO:0035147 P branch fusion, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0035212 P cell competition in a multicellular organism
GO:0035262 P gonad morphogenesis
GO:0036099 P female germ-line stem cell population maintenance
GO:0042060 P wound healing
GO:0042078 P germ-line stem cell division
GO:0042803 F protein homodimerization activity
GO:0043296 C apical junction complex
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045176 P apical protein localization
GO:0045186 P zonula adherens assembly
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048477 P oogenesis
GO:0050832 P defense response to fungus
GO:0050839 F cell adhesion molecule binding
GO:0055037 C recycling endosome
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0098730 P male germline stem cell symmetric division
4489 O_BomoMSG14040_3prime_partial:A_BomoMSG_c24622_g1_i2
211bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4490 O_BomoMSG14041_complete:A_BomoMSG_c24622_g1_i2
144bp
4491 O_BomoMSG14042_complete:A_BomoMSG_c24623_g1_i1
381bp
 UPF0489_protein_C5orf22_homolog_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
4492 O_BomoMSG14043_5prime_partial:A_BomoMSG_c24623_g1_i2
271bp
 UPF0489_protein_C5orf22_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4493 O_BomoMSG14044_5prime_partial:A_BomoMSG_c24624_g1_i1
174bp
 ubiquitin-conjugating_enzyme_E2Q-like_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
4494 O_BomoMSG14045_5prime_partial:A_BomoMSG_c24624_g1_i1
107bp
4495 O_BomoMSG14046_3prime_partial:A_BomoMSG_c24624_g1_i1
101bp
4496 O_BomoMSG14047_complete:A_BomoMSG_c24624_g1_i2
254bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2Q-like_protein_CG4502_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
4497 O_BomoMSG14048_complete:A_BomoMSG_c24624_g1_i2
197bp
4498 O_BomoMSG14049_5prime_partial:A_BomoMSG_c24624_g1_i2
107bp
4499 O_BomoMSG1404_internal:A_BomoMSG_c6599_g1_i1
146bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
4500 O_BomoMSG14050_internal:A_BomoMSG_c24628_g2_i1
303bp
 eukaryotic_translation_initiation_factor_2A_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0042255 P ribosome assembly
GO:0043022 F ribosome binding
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