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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4291 O_BomoMSG13863_internal:A_BomoMSG_c24547_g1_i1
499bp
 receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
4292 O_BomoMSG13864_complete:A_BomoMSG_c24547_g1_i1
140bp
4293 O_BomoMSG13865_internal:A_BomoMSG_c24547_g1_i2
589bp
 receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
4294 O_BomoMSG13866_complete:A_BomoMSG_c24547_g1_i2
140bp
4295 O_BomoMSG13867_internal:A_BomoMSG_c24547_g1_i3
422bp
 receptor-type_guanylate_cyclase_Gyc76C_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
4296 O_BomoMSG13868_complete:A_BomoMSG_c24547_g1_i3
140bp
4297 O_BomoMSG13869_3prime_partial:A_BomoMSG_c24548_g1_i1
401bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
4298 O_BomoMSG1386_internal:A_BomoMSG_c6394_g1_i1
248bp
 RNA-binding_protein_48_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
4299 O_BomoMSG13870_5prime_partial:A_BomoMSG_c24548_g1_i2
518bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
4300 O_BomoMSG13871_5prime_partial:A_BomoMSG_c24548_g1_i2
238bp
4301 O_BomoMSG13872_5prime_partial:A_BomoMSG_c24548_g1_i2
101bp
4302 O_BomoMSG13873_5prime_partial:A_BomoMSG_c24548_g1_i3
238bp
4303 O_BomoMSG13874_complete:A_BomoMSG_c24548_g1_i4
666bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
4304 O_BomoMSG13875_5prime_partial:A_BomoMSG_c24548_g1_i4
238bp
4305 O_BomoMSG13876_5prime_partial:A_BomoMSG_c24549_g1_i2
415bp
 protein_piccolo_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000415 P negative regulation of histone H3-K36 methylation
GO:0003714 F transcription corepressor activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0030502 P negative regulation of bone mineralization
GO:0031072 F heat shock protein binding
GO:0031519 C PcG protein complex
GO:0035518 P histone H2A monoubiquitination
GO:0042476 P odontogenesis
GO:0042826 F histone deacetylase binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0060021 P roof of mouth development
GO:0065001 P specification of axis polarity
GO:0070171 P negative regulation of tooth mineralization
4306 O_BomoMSG13877_5prime_partial:A_BomoMSG_c24550_g1_i2
501bp
 uncharacterized_protein_LOC101736416_[Bombyx_mori]
4307 O_BomoMSG13878_complete:A_BomoMSG_c24550_g1_i2
114bp
4308 O_BomoMSG13879_complete:A_BomoMSG_c24552_g3_i3
451bp
 ribosomal_protein_S6_kinase_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001662 P behavioral fear response
GO:0003009 P skeletal muscle contraction
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004711 F ribosomal protein S6 kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007281 P germ cell development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007616 P long-term memory
GO:0009408 P response to heat
GO:0009611 P response to wounding
GO:0009612 P response to mechanical stimulus
GO:0009636 P response to toxic substance
GO:0009749 P response to glucose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0014070 P response to organic cyclic compound
GO:0014732 P skeletal muscle atrophy
GO:0014878 P response to electrical stimulus involved in regulation of muscle adaptation
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0031929 P TOR signaling
GO:0032496 P response to lipopolysaccharide
GO:0032868 P response to insulin
GO:0032870 P cellular response to hormone stimulus
GO:0033574 P response to testosterone
GO:0033762 P response to glucagon
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043066 P negative regulation of apoptotic process
GO:0043200 P response to amino acid
GO:0043201 P response to leucine
GO:0043434 P response to peptide hormone
GO:0043491 P protein kinase B signaling
GO:0045202 C synapse
GO:0045471 P response to ethanol
GO:0045727 P positive regulation of translation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045948 P positive regulation of translational initiation
GO:0046324 P regulation of glucose import
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048471 C perinuclear region of cytoplasm
GO:0048633 P positive regulation of skeletal muscle tissue growth
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051384 P response to glucocorticoid
GO:0051721 F protein phosphatase 2A binding
GO:0071363 P cellular response to growth factor stimulus
GO:0071407 P cellular response to organic cyclic compound
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
4309 O_BomoMSG1387_complete:A_BomoMSG_c6401_g1_i1
107bp
 uncharacterized_protein_LOC101747036_[Bombyx_mori]
4310 O_BomoMSG13880_complete:A_BomoMSG_c24552_g3_i4
459bp
 ribosomal_protein_S6_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0043005 C neuron projection
GO:0043066 P negative regulation of apoptotic process
GO:0045202 C synapse
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0071363 P cellular response to growth factor stimulus
4311 O_BomoMSG13881_3prime_partial:A_BomoMSG_c24553_g1_i1
572bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
4312 O_BomoMSG13882_internal:A_BomoMSG_c24553_g1_i2
235bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0009311 P oligosaccharide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
4313 O_BomoMSG13883_3prime_partial:A_BomoMSG_c24553_g1_i3
572bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
4314 O_BomoMSG13884_internal:A_BomoMSG_c24553_g1_i4
547bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
4315 O_BomoMSG13885_5prime_partial:A_BomoMSG_c24554_g1_i2
634bp
 katanin_p80_WD40_repeat-containing_subunit_B1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008352 C katanin complex
GO:0051013 P microtubule severing
GO:0051301 P cell division
4316 O_BomoMSG13886_complete:A_BomoMSG_c24554_g1_i3
790bp
 katanin_p80_WD40_repeat-containing_subunit_B1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008352 C katanin complex
GO:0051013 P microtubule severing
GO:0051301 P cell division
4317 O_BomoMSG13887_5prime_partial:A_BomoMSG_c24554_g1_i4
411bp
 katanin_p80_WD40_repeat-containing_subunit_B1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0008352 C katanin complex
GO:0051013 P microtubule severing
GO:0051301 P cell division
4318 O_BomoMSG13888_5prime_partial:A_BomoMSG_c24555_g1_i1
569bp
 lipophorin_receptor_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001666 P response to hypoxia
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048813 P dendrite morphogenesis
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
GO:1900006 P positive regulation of dendrite development
4319 O_BomoMSG13889_complete:A_BomoMSG_c24555_g1_i2
215bp
 Very_low-density_lipoprotein_receptor_[Papilio_xuthus]
GO:0001666 P response to hypoxia
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007166 P cell surface receptor signaling pathway
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030296 F protein tyrosine kinase activator activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034361 C very-low-density lipoprotein particle
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
4320 O_BomoMSG1388_internal:A_BomoMSG_c6403_g1_i1
110bp
 LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
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