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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3931 O_BomoMSG13539_5prime_partial:A_BomoMSG_c24395_g1_i1
261bp
 uncharacterized_protein_LOC110376212_[Helicoverpa_armigera]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
3932 O_BomoMSG1353_3prime_partial:A_BomoMSG_c6183_g1_i1
468bp
 probable_ATP-dependent_RNA_helicase_DDX47_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3933 O_BomoMSG13540_complete:A_BomoMSG_c24396_g1_i1
224bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3934 O_BomoMSG13541_complete:A_BomoMSG_c24396_g1_i2
135bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X3_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3935 O_BomoMSG13542_complete:A_BomoMSG_c24396_g1_i3
221bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3936 O_BomoMSG13543_complete:A_BomoMSG_c24396_g1_i3
104bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X2_[Bombyx_mori]
3937 O_BomoMSG13544_5prime_partial:A_BomoMSG_c24396_g1_i4
220bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3938 O_BomoMSG13545_complete:A_BomoMSG_c24396_g1_i5
327bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3939 O_BomoMSG13546_5prime_partial:A_BomoMSG_c24396_g1_i6
120bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0018023 P peptidyl-lysine trimethylation
GO:0032259 P methylation
3940 O_BomoMSG13547_5prime_partial:A_BomoMSG_c24396_g1_i7
117bp
 protein-lysine_N-methyltransferase_EEF2KMT_isoform_X2_[Bombyx_mori]
3941 O_BomoMSG13548_complete:A_BomoMSG_c24397_g1_i1
1210bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
3942 O_BomoMSG13549_5prime_partial:A_BomoMSG_c24397_g1_i2
978bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
3943 O_BomoMSG1354_5prime_partial:A_BomoMSG_c6183_g1_i1
111bp
3944 O_BomoMSG13550_5prime_partial:A_BomoMSG_c24398_g1_i1
920bp
 uncharacterized_protein_LOC101740749_[Bombyx_mori]
3945 O_BomoMSG13551_complete:A_BomoMSG_c24398_g1_i1
134bp
3946 O_BomoMSG13552_complete:A_BomoMSG_c24398_g1_i1
114bp
3947 O_BomoMSG13553_internal:A_BomoMSG_c24400_g1_i1
309bp
 PREDICTED:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
3948 O_BomoMSG13554_internal:A_BomoMSG_c24400_g1_i2
166bp
 PREDICTED:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_[Papilio_polytes]
3949 O_BomoMSG13555_3prime_partial:A_BomoMSG_c24400_g2_i1
146bp
 Ubiquitin-conjugating_enzyme_E2_O_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
3950 O_BomoMSG13556_complete:A_BomoMSG_c24402_g1_i1
211bp
 metallo-beta-lactamase_domain-containing_protein_1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3951 O_BomoMSG13557_5prime_partial:A_BomoMSG_c24402_g1_i2
177bp
 metallo-beta-lactamase_domain-containing_protein_1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3952 O_BomoMSG13558_3prime_partial:A_BomoMSG_c24403_g1_i1
133bp
 pre-mRNA_3'_end_processing_protein_WDR33_isoform_X1_[Bombyx_mori]
3953 O_BomoMSG13559_internal:A_BomoMSG_c24404_g1_i1
128bp
 uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
3954 O_BomoMSG1355_5prime_partial:A_BomoMSG_c6187_g1_i1
108bp
 PREDICTED:_uncharacterized_protein_LOC106139192_[Amyelois_transitella]
3955 O_BomoMSG13560_internal:A_BomoMSG_c24404_g2_i1
228bp
 uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
3956 O_BomoMSG13561_3prime_partial:A_BomoMSG_c24406_g1_i1
299bp
 protein_phosphatase_PP2A_55_kDa_regulatory_subunit_isoform_X3_[Bombyx_mori]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
3957 O_BomoMSG13562_5prime_partial:A_BomoMSG_c24406_g1_i1
117bp
3958 O_BomoMSG13563_3prime_partial:A_BomoMSG_c24406_g1_i2
305bp
 serine/threonine-protein_phosphatase_2A_55_kDa_regulatory_subunit_B_alpha_isoform_isoform_X2_[Bombyx_mori]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
3959 O_BomoMSG13564_5prime_partial:A_BomoMSG_c24406_g1_i2
117bp
3960 O_BomoMSG13565_3prime_partial:A_BomoMSG_c24406_g1_i3
299bp
 protein_phosphatase_PP2A_55_kDa_regulatory_subunit_isoform_X3_[Bombyx_mori]
GO:0000159 C protein phosphatase type 2A complex
GO:0000278 P mitotic cell cycle
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006470 P protein dephosphorylation
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007099 P centriole replication
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007423 P sensory organ development
GO:0007447 P imaginal disc pattern formation
GO:0008601 F protein phosphatase regulator activity
GO:0016055 P Wnt signaling pathway
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0045201 P maintenance of neuroblast polarity
GO:0050821 P protein stabilization
GO:0051297 P centrosome cycle
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