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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3871 O_BomoMSG13485_5prime_partial:A_BomoMSG_c24368_g1_i4
309bp
 G-protein_coupled_receptor_143-like_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032400 P melanosome localization
GO:0032402 P melanosome transport
GO:0032438 P melanosome organization
GO:0033162 C melanosome membrane
GO:0035240 F dopamine binding
GO:0035584 P calcium-mediated signaling using intracellular calcium source
GO:0035643 F L-DOPA receptor activity
GO:0042470 C melanosome
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050848 P regulation of calcium-mediated signaling
GO:0072544 F L-DOPA binding
GO:0072545 F tyrosine binding
GO:1902908 P regulation of melanosome transport
GO:1903056 P regulation of melanosome organization
3872 O_BomoMSG13486_complete:A_BomoMSG_c24369_g1_i1
150bp
 adenylate_kinase_8_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0004127 F cytidylate kinase activity
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
GO:0021591 P ventricular system development
GO:0036126 C sperm flagellum
3873 O_BomoMSG13487_3prime_partial:A_BomoMSG_c24369_g2_i3
295bp
 adenylate_kinase_8_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0004127 F cytidylate kinase activity
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0009165 P nucleotide biosynthetic process
GO:0015949 P nucleobase-containing small molecule interconversion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
GO:0019206 F nucleoside kinase activity
GO:0021591 P ventricular system development
GO:0036126 C sperm flagellum
3874 O_BomoMSG13488_internal:A_BomoMSG_c24371_g1_i1
322bp
 rap1_GTPase-activating_protein_1_isoform_X5_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
3875 O_BomoMSG13489_3prime_partial:A_BomoMSG_c24371_g1_i2
415bp
 rap1_GTPase-activating_protein_1_isoform_X5_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003924 F GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017016 F small GTPase binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030695 F GTPase regulator activity
GO:0042803 F protein homodimerization activity
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:1903697 P negative regulation of microvillus assembly
GO:1904425 P negative regulation of GTP binding
GO:1904442 P negative regulation of thyroid gland epithelial cell proliferation
GO:1990792 P cellular response to glial cell derived neurotrophic factor
3876 O_BomoMSG1348_3prime_partial:A_BomoMSG_c6169_g1_i1
102bp
 hormone_receptor_39,_partial_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0003712 F transcription coregulator activity
GO:0004879 F nuclear receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0009755 P hormone-mediated signaling pathway
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030522 P intracellular receptor signaling pathway
GO:0035211 P spermathecum morphogenesis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060968 P obsolete regulation of gene silencing
GO:0090575 C RNA polymerase II transcription regulator complex
3877 O_BomoMSG13490_5prime_partial:A_BomoMSG_c24372_g1_i2
187bp
 GDP-fucose_transporter_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005456 F CMP-N-acetylneuraminate transmembrane transporter activity
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005458 F GDP-mannose transmembrane transporter activity
GO:0005459 F UDP-galactose transmembrane transporter activity
GO:0005460 F UDP-glucose transmembrane transporter activity
GO:0005461 F UDP-glucuronic acid transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005463 F UDP-N-acetylgalactosamine transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0006810 P transport
GO:0007625 P grooming behavior
GO:0008643 P carbohydrate transport
GO:0015782 P CMP-N-acetylneuraminate transmembrane transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015784 P GDP-mannose transmembrane transport
GO:0015785 P UDP-galactose transmembrane transport
GO:0015786 P UDP-glucose transmembrane transport
GO:0015787 P UDP-glucuronic acid transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015789 P UDP-N-acetylgalactosamine transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0036066 P protein O-linked fucosylation
GO:0036071 P N-glycan fucosylation
GO:0036085 P GDP-fucose import into Golgi lumen
GO:0048193 P Golgi vesicle transport
3878 O_BomoMSG13491_3prime_partial:A_BomoMSG_c24373_g1_i1
274bp
 protein_IWS1_homolog_[Bombyx_mori]
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
3879 O_BomoMSG13492_internal:A_BomoMSG_c24373_g1_i2
143bp
 protein_IWS1_homolog_[Bombyx_mori]
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
3880 O_BomoMSG13493_internal:A_BomoMSG_c24374_g1_i1
360bp
 methylcrotonoyl-CoA_carboxylase_subunit_alpha,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006552 P leucine catabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3881 O_BomoMSG13494_internal:A_BomoMSG_c24374_g1_i2
376bp
 methylcrotonoyl-CoA_carboxylase_subunit_alpha,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006552 P leucine catabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3882 O_BomoMSG13495_internal:A_BomoMSG_c24374_g1_i3
578bp
 methylcrotonoyl-CoA_carboxylase_subunit_alpha,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006552 P leucine catabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3883 O_BomoMSG13496_complete:A_BomoMSG_c24376_g1_i1
249bp
 uncharacterized_protein_LOC101746215_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000778 C kinetochore
GO:0000941 C inner kinetochore
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0007020 P microtubule nucleation
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0031134 P sister chromatid biorientation
GO:0031617 C NMS complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0051010 F microtubule plus-end binding
GO:1990758 P mitotic sister chromatid biorientation
3884 O_BomoMSG13497_internal:A_BomoMSG_c24378_g1_i1
324bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3885 O_BomoMSG13498_complete:A_BomoMSG_c24378_g2_i1
187bp
 28S_ribosomal_protein_S28,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
3886 O_BomoMSG13499_complete:A_BomoMSG_c24378_g2_i2
108bp
 28S_ribosomal_protein_S28,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
3887 O_BomoMSG1349_internal:A_BomoMSG_c6171_g1_i1
99bp
3888 O_BomoMSG134_complete:A_BomoMSG_c493_g1_i1
1137bp
 uncharacterized_protein_LOC101741379_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3889 O_BomoMSG13500_internal:A_BomoMSG_c24378_g1_i2
391bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3890 O_BomoMSG13501_complete:A_BomoMSG_c24380_g1_i1
794bp
 armadillo_segment_polarity_protein_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001105 F transcription coactivator activity
GO:0001709 P cell fate determination
GO:0001745 P compound eye morphogenesis
GO:0003136 P negative regulation of heart induction by canonical Wnt signaling pathway
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007367 P segment polarity determination
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007400 P neuroblast fate determination
GO:0007472 P wing disc morphogenesis
GO:0007507 P heart development
GO:0007616 P long-term memory
GO:0008092 F cytoskeletal protein binding
GO:0008134 F transcription factor binding
GO:0008360 P regulation of cell shape
GO:0014017 P neuroblast fate commitment
GO:0014019 P neuroblast development
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016342 C catenin complex
GO:0019900 F kinase binding
GO:0019903 F protein phosphatase binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0032403 F protein-containing complex binding
GO:0034333 P adherens junction assembly
GO:0035017 P cuticle pattern formation
GO:0035019 P somatic stem cell population maintenance
GO:0035147 P branch fusion, open tracheal system
GO:0035153 P epithelial cell type specification, open tracheal system
GO:0035293 P chitin-based larval cuticle pattern formation
GO:0045186 P zonula adherens assembly
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048477 P oogenesis
GO:0048526 P imaginal disc-derived wing expansion
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060232 P delamination
GO:0060429 P epithelium development
GO:0060914 P heart formation
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
3891 O_BomoMSG13502_complete:A_BomoMSG_c24380_g1_i1
134bp
 hypothetical_protein_WN51_12917_[Melipona_quadrifasciata]
3892 O_BomoMSG13503_complete:A_BomoMSG_c24380_g1_i2
794bp
 armadillo_segment_polarity_protein_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001105 F transcription coactivator activity
GO:0001709 P cell fate determination
GO:0001745 P compound eye morphogenesis
GO:0003136 P negative regulation of heart induction by canonical Wnt signaling pathway
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007367 P segment polarity determination
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007400 P neuroblast fate determination
GO:0007472 P wing disc morphogenesis
GO:0007507 P heart development
GO:0007616 P long-term memory
GO:0008092 F cytoskeletal protein binding
GO:0008134 F transcription factor binding
GO:0008360 P regulation of cell shape
GO:0014017 P neuroblast fate commitment
GO:0014019 P neuroblast development
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016342 C catenin complex
GO:0019900 F kinase binding
GO:0019903 F protein phosphatase binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0032403 F protein-containing complex binding
GO:0034333 P adherens junction assembly
GO:0035017 P cuticle pattern formation
GO:0035019 P somatic stem cell population maintenance
GO:0035147 P branch fusion, open tracheal system
GO:0035153 P epithelial cell type specification, open tracheal system
GO:0035293 P chitin-based larval cuticle pattern formation
GO:0045186 P zonula adherens assembly
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048477 P oogenesis
GO:0048526 P imaginal disc-derived wing expansion
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060232 P delamination
GO:0060429 P epithelium development
GO:0060914 P heart formation
GO:0071896 P protein localization to adherens junction
GO:0072659 P protein localization to plasma membrane
3893 O_BomoMSG13504_complete:A_BomoMSG_c24380_g1_i2
134bp
 hypothetical_protein_WN51_12917_[Melipona_quadrifasciata]
3894 O_BomoMSG13505_internal:A_BomoMSG_c24381_g1_i1
595bp
 tyrosine-protein_phosphatase_non-receptor_type_23_[Bombyx_mori]
3895 O_BomoMSG13506_5prime_partial:A_BomoMSG_c24381_g1_i1
191bp
3896 O_BomoMSG13507_complete:A_BomoMSG_c24381_g1_i1
137bp
3897 O_BomoMSG13508_internal:A_BomoMSG_c24381_g1_i2
515bp
 tyrosine-protein_phosphatase_non-receptor_type_23_[Bombyx_mori]
3898 O_BomoMSG13509_5prime_partial:A_BomoMSG_c24381_g1_i2
191bp
3899 O_BomoMSG1350_internal:A_BomoMSG_c6178_g1_i1
108bp
 MAGUK_p55_subfamily_member_7_[Bombyx_mori]
GO:0001841 P neural tube formation
GO:0001917 C photoreceptor inner segment
GO:0002011 P morphogenesis of an epithelial sheet
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007420 P brain development
GO:0008078 P mesodermal cell migration
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016337 P cell-cell adhesion
GO:0021744 P dorsal motor nucleus of vagus nerve development
GO:0030054 C cell junction
GO:0031226 C intrinsic component of plasma membrane
GO:0035050 P embryonic heart tube development
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0043296 C apical junction complex
GO:0045176 P apical protein localization
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045199 P maintenance of epithelial cell apical/basal polarity
GO:0048699 P generation of neurons
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060042 P retina morphogenesis in camera-type eye
GO:0060059 P embryonic retina morphogenesis in camera-type eye
GO:0070830 P bicellular tight junction assembly
GO:0090162 P establishment of epithelial cell polarity
3900 O_BomoMSG13510_complete:A_BomoMSG_c24381_g1_i2
137bp
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