Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3811	O_BomoMSG13430_3prime_partial:A_BomoMSG_c24341_g1_i3 205bp	Bomo_Chr13	lipoyl_synthase,_mitochondrial_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005739 C mitochondrion GO:0009107 P lipoate biosynthetic process GO:0016740 F transferase activity GO:0016992 F lipoate synthase activity GO:0046872 F metal ion binding GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding
3812	O_BomoMSG13431_5prime_partial:A_BomoMSG_c24341_g1_i3 151bp	Bomo_Chr13	hypothetical_protein_AWJ20_4674_[Sugiyamaella_lignohabitans]
3813	O_BomoMSG13432_internal:A_BomoMSG_c24342_g1_i1 123bp	Bomo_Chr25	exocyst_complex_component_5_[Bombyx_mori]	GO:0000145 C exocyst GO:0005737 C cytoplasm GO:0006810 P transport GO:0006887 P exocytosis GO:0007269 P neurotransmitter secretion GO:0008013 F beta-catenin binding GO:0015031 P protein transport GO:0016080 P synaptic vesicle targeting GO:0016081 P synaptic vesicle docking GO:0016192 P vesicle-mediated transport GO:0048278 P vesicle docking GO:0090522 P vesicle tethering involved in exocytosis GO:0098793 C presynapse
3814	O_BomoMSG13433_3prime_partial:A_BomoMSG_c24342_g1_i2 208bp	Bomo_Chr25	exocyst_complex_component_5_[Bombyx_mori]	GO:0000145 C exocyst GO:0005737 C cytoplasm GO:0006810 P transport GO:0006887 P exocytosis GO:0007269 P neurotransmitter secretion GO:0008013 F beta-catenin binding GO:0015031 P protein transport GO:0016080 P synaptic vesicle targeting GO:0016081 P synaptic vesicle docking GO:0016192 P vesicle-mediated transport GO:0048278 P vesicle docking GO:0090522 P vesicle tethering involved in exocytosis GO:0098793 C presynapse
3815	O_BomoMSG13434_complete:A_BomoMSG_c24343_g1_i1 495bp	Bomo_Chr27	solute_carrier_family_41_member_1_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0008324 F cation transmembrane transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0070838 P metal ion transport GO:0072509 F inorganic cation transmembrane transporter activity GO:0098655 P cation transmembrane transport
3816	O_BomoMSG13435_complete:A_BomoMSG_c24343_g1_i1 125bp	Bomo_Chr27
3817	O_BomoMSG13436_complete:A_BomoMSG_c24343_g1_i2 495bp	Bomo_Chr27	solute_carrier_family_41_member_1_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0008324 F cation transmembrane transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0070838 P metal ion transport GO:0072509 F inorganic cation transmembrane transporter activity GO:0098655 P cation transmembrane transport
3818	O_BomoMSG13437_complete:A_BomoMSG_c24343_g1_i2 125bp	Bomo_Chr27
3819	O_BomoMSG13438_complete:A_BomoMSG_c24343_g1_i3 495bp	Bomo_Chr27	solute_carrier_family_41_member_1_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006812 P cation transport GO:0008324 F cation transmembrane transporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0070838 P metal ion transport GO:0072509 F inorganic cation transmembrane transporter activity GO:0098655 P cation transmembrane transport
3820	O_BomoMSG13439_complete:A_BomoMSG_c24343_g1_i3 125bp	Bomo_Chr27
3821	O_BomoMSG1343_internal:A_BomoMSG_c6147_g1_i1 101bp	Bomo_Chr20	oxysterol-binding_protein-related_protein_3_[Bombyx_mori]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0006810 P transport GO:0006869 P lipid transport GO:0008289 F lipid binding GO:0016020 C membrane GO:0031965 C nuclear membrane GO:0097038 C perinuclear endoplasmic reticulum
3822	O_BomoMSG13440_5prime_partial:A_BomoMSG_c24345_g1_i1 191bp	Bomo_Chr11	mitochondrial_ribosome-associated_GTPase_2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005759 C mitochondrial matrix GO:0005761 C mitochondrial ribosome GO:0006417 P regulation of translation GO:0008152 P metabolic process GO:0016020 C membrane GO:0042254 P ribosome biogenesis GO:0044065 P regulation of respiratory system process GO:0046872 F metal ion binding GO:0070129 P regulation of mitochondrial translation
3823	O_BomoMSG13441_5prime_partial:A_BomoMSG_c24345_g1_i1 121bp	Bomo_Chr11
3824	O_BomoMSG13442_5prime_partial:A_BomoMSG_c24345_g1_i2 218bp	Bomo_Chr11	mitochondrial_ribosome-associated_GTPase_2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005759 C mitochondrial matrix GO:0005761 C mitochondrial ribosome GO:0006417 P regulation of translation GO:0008152 P metabolic process GO:0016020 C membrane GO:0042254 P ribosome biogenesis GO:0044065 P regulation of respiratory system process GO:0046872 F metal ion binding GO:0070129 P regulation of mitochondrial translation
3825	O_BomoMSG13443_5prime_partial:A_BomoMSG_c24345_g1_i3 172bp	Bomo_Chr11	mitochondrial_ribosome-associated_GTPase_2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005759 C mitochondrial matrix GO:0005761 C mitochondrial ribosome GO:0006417 P regulation of translation GO:0008152 P metabolic process GO:0016020 C membrane GO:0042254 P ribosome biogenesis GO:0044065 P regulation of respiratory system process GO:0046872 F metal ion binding GO:0070129 P regulation of mitochondrial translation
3826	O_BomoMSG13444_5prime_partial:A_BomoMSG_c24345_g1_i3 102bp	Bomo_Chr11
3827	O_BomoMSG13445_5prime_partial:A_BomoMSG_c24346_g1_i1 101bp	Bomo_Chr4
3828	O_BomoMSG13446_3prime_partial:A_BomoMSG_c24347_g1_i1 282bp	Bomo_Chr18	uncharacterized_protein_LOC101737914_isoform_X1_[Bombyx_mori]
3829	O_BomoMSG13447_internal:A_BomoMSG_c24347_g1_i2 130bp	Bomo_Chr18	uncharacterized_protein_LOC101737914_isoform_X9_[Bombyx_mori]
3830	O_BomoMSG13448_internal:A_BomoMSG_c24347_g1_i3 247bp	Bomo_Chr18	uncharacterized_protein_LOC101737914_isoform_X1_[Bombyx_mori]
3831	O_BomoMSG13449_5prime_partial:A_BomoMSG_c24349_g1_i1 101bp	Bomo_Chr5	uncharacterized_protein_LOC101742602_[Bombyx_mori]
3832	O_BomoMSG1344_internal:A_BomoMSG_c6153_g1_i1 115bp	Bomo_Chr25	DNA_polymerase_epsilon_catalytic_subunit_A_[Bombyx_mori]	GO:0000082 P G1/S transition of mitotic cell cycle GO:0000166 F nucleotide binding GO:0000722 P telomere maintenance via recombination GO:0000731 P DNA synthesis involved in DNA repair GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0003887 F DNA-directed DNA polymerase activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005886 C plasma membrane GO:0006260 P DNA replication GO:0006270 P DNA replication initiation GO:0006281 P DNA repair GO:0006287 P base-excision repair, gap-filling GO:0006297 P nucleotide-excision repair, DNA gap filling GO:0006974 P cellular response to DNA damage stimulus GO:0008270 F zinc ion binding GO:0008408 F 3'-5' exonuclease activity GO:0008622 C epsilon DNA polymerase complex GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0046872 F metal ion binding GO:0048568 P embryonic organ development GO:0051536 F iron-sulfur cluster binding GO:0051539 F 4 iron, 4 sulfur cluster binding GO:0071897 P DNA biosynthetic process GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3833	O_BomoMSG13450_complete:A_BomoMSG_c24349_g1_i2 474bp	Bomo_Chr5	uncharacterized_protein_LOC101742602_[Bombyx_mori]
3834	O_BomoMSG13451_5prime_partial:A_BomoMSG_c24351_g1_i1 345bp	Bomo_Chr6	autophagy-related_protein_16-1_isoform_X2_[Bombyx_mori]	GO:0000045 P autophagosome assembly GO:0000421 C autophagosome membrane GO:0005737 C cytoplasm GO:0006810 P transport GO:0006914 P autophagy GO:0015031 P protein transport GO:0016020 C membrane GO:0034045 C phagophore assembly site membrane GO:0039689 P negative stranded viral RNA replication
3835	O_BomoMSG13452_3prime_partial:A_BomoMSG_c24351_g2_i1 235bp	Bomo_Chr6	autophagy-related_protein_16-1_isoform_X2_[Helicoverpa_armigera]	GO:0000045 P autophagosome assembly GO:0000421 C autophagosome membrane GO:0005737 C cytoplasm GO:0006810 P transport GO:0006914 P autophagy GO:0015031 P protein transport GO:0016020 C membrane GO:0034045 C phagophore assembly site membrane GO:0039689 P negative stranded viral RNA replication
3836	O_BomoMSG13453_5prime_partial:A_BomoMSG_c24351_g1_i2 321bp	Bomo_Chr6	autophagy-related_protein_16_isoform_X1_[Bombyx_mori]	GO:0000045 P autophagosome assembly GO:0000421 C autophagosome membrane GO:0005737 C cytoplasm GO:0006810 P transport GO:0006914 P autophagy GO:0015031 P protein transport GO:0016020 C membrane GO:0034045 C phagophore assembly site membrane GO:0039689 P negative stranded viral RNA replication
3837	O_BomoMSG13454_3prime_partial:A_BomoMSG_c24354_g1_i1 471bp	Bomo_Chr16	uncharacterized_protein_LOC110375605_[Helicoverpa_armigera]
3838	O_BomoMSG13455_internal:A_BomoMSG_c24354_g1_i2 228bp	Bomo_Chr16	Uncharacterized_protein_OBRU01_02683_[Operophtera_brumata]
3839	O_BomoMSG13456_internal:A_BomoMSG_c24354_g1_i3 250bp	Bomo_Chr16	Uncharacterized_protein_OBRU01_02683_[Operophtera_brumata]
3840	O_BomoMSG13457_3prime_partial:A_BomoMSG_c24357_g1_i1 194bp	Bomo_Chr8	phosphopantothenoylcysteine_decarboxylase_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004633 F phosphopantothenoylcysteine decarboxylase activity GO:0005575 C cellular_component GO:0015937 P coenzyme A biosynthetic process GO:0016829 F lyase activity GO:0016831 F carboxy-lyase activity