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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3721 O_BomoMSG1334_internal:A_BomoMSG_c6117_g1_i1
152bp
 Plexin-B_[Papilio_xuthus]
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
3722 O_BomoMSG13350_complete:A_BomoMSG_c24305_g1_i2
209bp
3723 O_BomoMSG13351_complete:A_BomoMSG_c24305_g1_i2
191bp
3724 O_BomoMSG13352_5prime_partial:A_BomoMSG_c24305_g1_i2
106bp
 hypothetical_protein_ALC56_09687_[Trachymyrmex_septentrionalis]
3725 O_BomoMSG13353_3prime_partial:A_BomoMSG_c24305_g1_i2
103bp
3726 O_BomoMSG13354_5prime_partial:A_BomoMSG_c24305_g1_i2
101bp
3727 O_BomoMSG13355_internal:A_BomoMSG_c24305_g1_i3
784bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
3728 O_BomoMSG13356_complete:A_BomoMSG_c24305_g1_i3
209bp
3729 O_BomoMSG13357_5prime_partial:A_BomoMSG_c24305_g1_i3
106bp
 hypothetical_protein_ALC56_09687_[Trachymyrmex_septentrionalis]
3730 O_BomoMSG13358_3prime_partial:A_BomoMSG_c24305_g1_i3
103bp
3731 O_BomoMSG13359_complete:A_BomoMSG_c24306_g1_i3
517bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3732 O_BomoMSG1335_3prime_partial:A_BomoMSG_c6126_g1_i1
107bp
 WD_repeat_and_FYVE_domain-containing_protein_3_isoform_X3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
3733 O_BomoMSG13360_complete:A_BomoMSG_c24306_g1_i5
517bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3734 O_BomoMSG13361_complete:A_BomoMSG_c24306_g1_i8
517bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3735 O_BomoMSG13362_complete:A_BomoMSG_c24308_g1_i2
144bp
 phosphatidylglycerophosphatase_and_protein-tyrosine_phosphatase_1_isoform_X3_[Bombyx_mori]
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008654 P phospholipid biosynthetic process
GO:0008962 F phosphatidylglycerophosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0022008 P neurogenesis
GO:0035335 P peptidyl-tyrosine dephosphorylation
3736 O_BomoMSG13363_complete:A_BomoMSG_c24308_g1_i3
197bp
 phosphatidylglycerophosphatase_and_protein-tyrosine_phosphatase_1_isoform_X1_[Bombyx_mori]
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008654 P phospholipid biosynthetic process
GO:0008962 F phosphatidylglycerophosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0022008 P neurogenesis
GO:0035335 P peptidyl-tyrosine dephosphorylation
3737 O_BomoMSG13364_5prime_partial:A_BomoMSG_c24308_g1_i5
107bp
 phosphatidylglycerophosphatase_and_protein-tyrosine_phosphatase_1_isoform_X1_[Bombyx_mori]
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008654 P phospholipid biosynthetic process
GO:0008962 F phosphatidylglycerophosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0022008 P neurogenesis
GO:0035335 P peptidyl-tyrosine dephosphorylation
3738 O_BomoMSG13365_5prime_partial:A_BomoMSG_c24309_g1_i1
520bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
3739 O_BomoMSG13366_complete:A_BomoMSG_c24309_g1_i1
101bp
3740 O_BomoMSG13367_5prime_partial:A_BomoMSG_c24309_g1_i2
581bp
 luciferin_4-monooxygenase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
3741 O_BomoMSG13368_complete:A_BomoMSG_c24309_g1_i2
101bp
3742 O_BomoMSG13369_5prime_partial:A_BomoMSG_c24310_g1_i1
190bp
 putative_lipoyltransferase_2,_mitochondrial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0009107 P lipoate biosynthetic process
GO:0009249 P protein lipoylation
GO:0016415 F octanoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016874 F ligase activity
GO:0033819 F lipoyl(octanoyl) transferase activity
3743 O_BomoMSG1336_complete:A_BomoMSG_c6127_g1_i1
672bp
 HBS1-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0006412 P translation
GO:0006414 P translational elongation
3744 O_BomoMSG13370_complete:A_BomoMSG_c24310_g1_i2
244bp
 putative_lipoyltransferase_2,_mitochondrial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0009107 P lipoate biosynthetic process
GO:0009249 P protein lipoylation
GO:0016415 F octanoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016874 F ligase activity
GO:0033819 F lipoyl(octanoyl) transferase activity
3745 O_BomoMSG13371_internal:A_BomoMSG_c24311_g1_i1
339bp
 U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X1_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005794 C Golgi apparatus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
3746 O_BomoMSG13372_5prime_partial:A_BomoMSG_c24311_g1_i1
298bp
3747 O_BomoMSG13373_5prime_partial:A_BomoMSG_c24311_g1_i1
154bp
3748 O_BomoMSG13374_internal:A_BomoMSG_c24311_g1_i2
154bp
3749 O_BomoMSG13375_internal:A_BomoMSG_c24311_g1_i2
153bp
 U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
3750 O_BomoMSG13376_internal:A_BomoMSG_c24311_g1_i2
153bp
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