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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3691 O_BomoMSG13322_internal:A_BomoMSG_c24294_g1_i1
167bp
 uncharacterized_protein_LOC101741971_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0042273 P ribosomal large subunit biogenesis
GO:0043023 F ribosomal large subunit binding
GO:0070130 P negative regulation of mitochondrial translation
GO:0090071 P negative regulation of ribosome biogenesis
3692 O_BomoMSG13323_complete:A_BomoMSG_c24294_g1_i1
137bp
3693 O_BomoMSG13324_internal:A_BomoMSG_c24296_g1_i1
298bp
 activin_receptor_type-1_isoform_X2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001569 P branching involved in blood vessel morphogenesis
GO:0001702 P gastrulation with mouth forming second
GO:0001707 P mesoderm formation
GO:0001755 P neural crest cell migration
GO:0002526 P acute inflammatory response
GO:0003143 P embryonic heart tube morphogenesis
GO:0003183 P mitral valve morphogenesis
GO:0003289 P atrial septum primum morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007281 P germ cell development
GO:0007368 P determination of left/right symmetry
GO:0007369 P gastrulation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0009968 P negative regulation of signal transduction
GO:0010694 P positive regulation of alkaline phosphatase activity
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016361 F activin receptor activity, type I
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019838 F growth factor binding
GO:0023014 P signal transduction
GO:0030278 P regulation of ossification
GO:0030335 P positive regulation of cell migration
GO:0030501 P positive regulation of bone mineralization
GO:0030509 P BMP signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0032924 P activin receptor signaling pathway
GO:0032926 P negative regulation of activin receptor signaling pathway
GO:0035556 P intracellular signal transduction
GO:0042118 P endothelial cell activation
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048179 C activin receptor complex
GO:0048185 F activin binding
GO:0048762 P mesenchymal cell differentiation
GO:0050431 F transforming growth factor beta binding
GO:0051145 P smooth muscle cell differentiation
GO:0060037 P pharyngeal system development
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060389 P pathway-restricted SMAD protein phosphorylation
GO:0060923 P cardiac muscle cell fate commitment
GO:0061445 P endocardial cushion cell fate commitment
GO:0071773 P cellular response to BMP stimulus
GO:2000017 P positive regulation of determination of dorsal identity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3694 O_BomoMSG13325_5prime_partial:A_BomoMSG_c24296_g1_i1
228bp
 PREDICTED:_netrin_receptor_UNC5C_[Astyanax_mexicanus]
3695 O_BomoMSG13326_5prime_partial:A_BomoMSG_c24296_g1_i1
129bp
3696 O_BomoMSG13327_internal:A_BomoMSG_c24296_g1_i2
265bp
 activin_receptor_type-1_isoform_X1_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0001569 P branching involved in blood vessel morphogenesis
GO:0001702 P gastrulation with mouth forming second
GO:0001707 P mesoderm formation
GO:0001755 P neural crest cell migration
GO:0002526 P acute inflammatory response
GO:0003143 P embryonic heart tube morphogenesis
GO:0003183 P mitral valve morphogenesis
GO:0003289 P atrial septum primum morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007281 P germ cell development
GO:0007368 P determination of left/right symmetry
GO:0007369 P gastrulation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0009968 P negative regulation of signal transduction
GO:0010694 P positive regulation of alkaline phosphatase activity
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016361 F activin receptor activity, type I
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019838 F growth factor binding
GO:0023014 P signal transduction
GO:0030278 P regulation of ossification
GO:0030335 P positive regulation of cell migration
GO:0030501 P positive regulation of bone mineralization
GO:0030509 P BMP signaling pathway
GO:0030513 P positive regulation of BMP signaling pathway
GO:0032924 P activin receptor signaling pathway
GO:0032926 P negative regulation of activin receptor signaling pathway
GO:0035556 P intracellular signal transduction
GO:0042118 P endothelial cell activation
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048179 C activin receptor complex
GO:0048185 F activin binding
GO:0048762 P mesenchymal cell differentiation
GO:0050431 F transforming growth factor beta binding
GO:0051145 P smooth muscle cell differentiation
GO:0060037 P pharyngeal system development
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060389 P pathway-restricted SMAD protein phosphorylation
GO:0060923 P cardiac muscle cell fate commitment
GO:0061445 P endocardial cushion cell fate commitment
GO:0071773 P cellular response to BMP stimulus
GO:2000017 P positive regulation of determination of dorsal identity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
3697 O_BomoMSG13328_5prime_partial:A_BomoMSG_c24296_g1_i2
228bp
 PREDICTED:_netrin_receptor_UNC5C_[Astyanax_mexicanus]
3698 O_BomoMSG13329_5prime_partial:A_BomoMSG_c24296_g1_i2
129bp
3699 O_BomoMSG1332_internal:A_BomoMSG_c6114_g1_i1
120bp
 NUAK_family_SNF1-like_kinase_1_isoform_X3_[Bombyx_mori]
3700 O_BomoMSG13330_internal:A_BomoMSG_c24296_g1_i3
156bp
 activin_receptor_type-1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001655 P urogenital system development
GO:0001701 P in utero embryonic development
GO:0001755 P neural crest cell migration
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007281 P germ cell development
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016361 F activin receptor activity, type I
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0032924 P activin receptor signaling pathway
GO:0046872 F metal ion binding
GO:0048179 C activin receptor complex
GO:0050431 F transforming growth factor beta binding
3701 O_BomoMSG13331_internal:A_BomoMSG_c24296_g1_i3
156bp
3702 O_BomoMSG13332_5prime_partial:A_BomoMSG_c24296_g1_i3
129bp
3703 O_BomoMSG13333_3prime_partial:A_BomoMSG_c24299_g1_i1
360bp
 zinc_finger_protein_205_isoform_X3_[Bombyx_mori]
3704 O_BomoMSG13334_complete:A_BomoMSG_c24299_g1_i1
164bp
3705 O_BomoMSG13335_internal:A_BomoMSG_c24299_g1_i2
308bp
 zinc_finger_protein_205_isoform_X3_[Bombyx_mori]
3706 O_BomoMSG13336_complete:A_BomoMSG_c24299_g1_i2
164bp
3707 O_BomoMSG13337_3prime_partial:A_BomoMSG_c24299_g1_i3
360bp
 zinc_finger_protein_205_isoform_X3_[Bombyx_mori]
3708 O_BomoMSG13338_complete:A_BomoMSG_c24299_g1_i3
164bp
3709 O_BomoMSG13339_internal:A_BomoMSG_c24302_g1_i1
123bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
3710 O_BomoMSG1333_internal:A_BomoMSG_c6114_g1_i1
119bp
3711 O_BomoMSG13340_internal:A_BomoMSG_c24302_g1_i2
392bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
3712 O_BomoMSG13341_complete:A_BomoMSG_c24302_g1_i2
247bp
3713 O_BomoMSG13342_complete:A_BomoMSG_c24304_g1_i1
159bp
 hydroxyacyl-thioester_dehydratase_type_2,_mitochondrial-like_[Bombyx_mori]
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016829 F lyase activity
3714 O_BomoMSG13343_complete:A_BomoMSG_c24304_g1_i2
159bp
 hydroxyacyl-thioester_dehydratase_type_2,_mitochondrial-like_[Bombyx_mori]
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016829 F lyase activity
3715 O_BomoMSG13344_internal:A_BomoMSG_c24305_g1_i1
867bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
3716 O_BomoMSG13345_complete:A_BomoMSG_c24305_g1_i1
209bp
3717 O_BomoMSG13346_3prime_partial:A_BomoMSG_c24305_g1_i1
152bp
3718 O_BomoMSG13347_5prime_partial:A_BomoMSG_c24305_g1_i1
106bp
 hypothetical_protein_ALC56_09687_[Trachymyrmex_septentrionalis]
3719 O_BomoMSG13348_3prime_partial:A_BomoMSG_c24305_g1_i1
103bp
3720 O_BomoMSG13349_internal:A_BomoMSG_c24305_g1_i2
1029bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
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