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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3361 O_BomoMSG13025_complete:A_BomoMSG_c24147_g1_i7
380bp
 leukocyte_receptor_cluster_member_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3362 O_BomoMSG13026_internal:A_BomoMSG_c24148_g1_i1
123bp
 reverse_transcriptase,_partial_[Bombyx_mori]
3363 O_BomoMSG13027_5prime_partial:A_BomoMSG_c24148_g1_i1
110bp
3364 O_BomoMSG13028_complete:A_BomoMSG_c24149_g1_i1
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
3365 O_BomoMSG13029_complete:A_BomoMSG_c24149_g1_i1
105bp
3366 O_BomoMSG1302_internal:A_BomoMSG_c5935_g1_i1
165bp
 suppressor_of_fused_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001843 P neural tube closure
GO:0001947 P heart looping
GO:0003281 P ventricular septum development
GO:0003714 F transcription corepressor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0008013 F beta-catenin binding
GO:0008134 F transcription factor binding
GO:0019901 F protein kinase binding
GO:0021513 P spinal cord dorsal/ventral patterning
GO:0021775 P smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776 P smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904 P aorta development
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043588 P skin development
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0060976 P coronary vasculature development
GO:0072372 C cilium
GO:1901621 P negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
3367 O_BomoMSG13030_complete:A_BomoMSG_c24149_g1_i2
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
3368 O_BomoMSG13031_complete:A_BomoMSG_c24149_g1_i2
105bp
3369 O_BomoMSG13032_complete:A_BomoMSG_c24149_g1_i3
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
3370 O_BomoMSG13033_complete:A_BomoMSG_c24149_g1_i3
105bp
3371 O_BomoMSG13034_5prime_partial:A_BomoMSG_c24150_g1_i1
245bp
 carboxy-terminal_domain_RNA_polymerase_II_polypeptide_A_small_phosphatase_1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006470 P protein dephosphorylation
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0050768 P negative regulation of neurogenesis
GO:0070062 C extracellular exosome
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
3372 O_BomoMSG13035_complete:A_BomoMSG_c24152_g2_i1
124bp
 cuticular_protein_RR-1_motif_51_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
3373 O_BomoMSG13036_complete:A_BomoMSG_c24152_g2_i1
121bp
3374 O_BomoMSG13037_3prime_partial:A_BomoMSG_c24154_g1_i1
322bp
 E3_ubiquitin-protein_ligase_KCMF1,_partial_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3375 O_BomoMSG13038_5prime_partial:A_BomoMSG_c24154_g1_i1
258bp
3376 O_BomoMSG13039_5prime_partial:A_BomoMSG_c24154_g1_i1
144bp
3377 O_BomoMSG1303_5prime_partial:A_BomoMSG_c5935_g1_i1
157bp
3378 O_BomoMSG13040_complete:A_BomoMSG_c24155_g1_i1
384bp
 WD_repeat-containing_protein_89_[Bombyx_mori]
3379 O_BomoMSG13041_complete:A_BomoMSG_c24155_g1_i1
123bp
3380 O_BomoMSG13042_internal:A_BomoMSG_c24157_g1_i2
347bp
 tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
3381 O_BomoMSG13043_complete:A_BomoMSG_c24157_g1_i2
223bp
3382 O_BomoMSG13044_internal:A_BomoMSG_c24158_g1_i1
168bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
3383 O_BomoMSG13045_complete:A_BomoMSG_c24159_g1_i1
655bp
 cytoplasmic_dynein_1_intermediate_chain_isoform_X17_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007291 P sperm individualization
GO:0007349 P cellularization
GO:0008088 P axo-dendritic transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016482 P cytosolic transport
GO:0030286 C dynein complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0043005 C neuron projection
GO:0045503 F dynein light chain binding
GO:0045504 F dynein heavy chain binding
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
3384 O_BomoMSG13046_complete:A_BomoMSG_c24159_g1_i1
168bp
 cytoplasmic_dynein_1_intermediate_chain_isoform_X20_[Bombyx_mori]
3385 O_BomoMSG13047_complete:A_BomoMSG_c24159_g1_i1
166bp
3386 O_BomoMSG13048_complete:A_BomoMSG_c24159_g1_i1
119bp
3387 O_BomoMSG13049_5prime_partial:A_BomoMSG_c24159_g1_i2
530bp
 cytoplasmic_dynein_1_intermediate_chain_isoform_X10_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007291 P sperm individualization
GO:0007349 P cellularization
GO:0008088 P axo-dendritic transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016482 P cytosolic transport
GO:0030286 C dynein complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0043005 C neuron projection
GO:0045503 F dynein light chain binding
GO:0045504 F dynein heavy chain binding
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
3388 O_BomoMSG1304_internal:A_BomoMSG_c5940_g1_i1
171bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
3389 O_BomoMSG13050_complete:A_BomoMSG_c24159_g1_i2
168bp
 cytoplasmic_dynein_1_intermediate_chain_isoform_X20_[Bombyx_mori]
3390 O_BomoMSG13051_complete:A_BomoMSG_c24159_g1_i2
166bp
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