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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3301 O_BomoMSG12972_complete:A_BomoMSG_c24130_g1_i3
164bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3302 O_BomoMSG12973_5prime_partial:A_BomoMSG_c24130_g1_i4
297bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3303 O_BomoMSG12974_complete:A_BomoMSG_c24130_g1_i4
164bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3304 O_BomoMSG12975_5prime_partial:A_BomoMSG_c24131_g2_i1
488bp
 ABC_transporter_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004888 F transmembrane signaling receptor activity
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0007165 P signal transduction
GO:0007613 P memory
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0031410 C cytoplasmic vesicle
GO:0042332 P gravitaxis
GO:0042401 P cellular biogenic amine biosynthetic process
GO:0042441 P eye pigment metabolic process
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0048072 P compound eye pigmentation
GO:0055085 P transmembrane transport
GO:0070731 P cGMP transport
3305 O_BomoMSG12976_complete:A_BomoMSG_c24131_g2_i1
116bp
3306 O_BomoMSG12977_complete:A_BomoMSG_c24131_g2_i2
688bp
 ABC_transporter_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004888 F transmembrane signaling receptor activity
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0007165 P signal transduction
GO:0007613 P memory
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0031410 C cytoplasmic vesicle
GO:0042332 P gravitaxis
GO:0042401 P cellular biogenic amine biosynthetic process
GO:0042441 P eye pigment metabolic process
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0048072 P compound eye pigmentation
GO:0055085 P transmembrane transport
GO:0070731 P cGMP transport
3307 O_BomoMSG12978_complete:A_BomoMSG_c24131_g2_i2
143bp
3308 O_BomoMSG12979_complete:A_BomoMSG_c24131_g2_i2
116bp
3309 O_BomoMSG1297_internal:A_BomoMSG_c5926_g1_i1
127bp
3310 O_BomoMSG12980_complete:A_BomoMSG_c24131_g2_i3
293bp
 ABC_transporter_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004888 F transmembrane signaling receptor activity
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0007165 P signal transduction
GO:0007613 P memory
GO:0008049 P male courtship behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0031410 C cytoplasmic vesicle
GO:0042332 P gravitaxis
GO:0042401 P cellular biogenic amine biosynthetic process
GO:0042441 P eye pigment metabolic process
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0048072 P compound eye pigmentation
GO:0055085 P transmembrane transport
GO:0070731 P cGMP transport
3311 O_BomoMSG12981_complete:A_BomoMSG_c24131_g2_i3
116bp
3312 O_BomoMSG12982_3prime_partial:A_BomoMSG_c24132_g1_i2
613bp
 uncharacterized_protein_LOC110373622_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3313 O_BomoMSG12983_3prime_partial:A_BomoMSG_c24133_g1_i1
253bp
 E3_ubiquitin-protein_ligase_listerin_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:1990116 P ribosome-associated ubiquitin-dependent protein catabolic process
3314 O_BomoMSG12984_5prime_partial:A_BomoMSG_c24133_g1_i1
145bp
3315 O_BomoMSG12985_complete:A_BomoMSG_c24133_g1_i1
104bp
3316 O_BomoMSG12986_5prime_partial:A_BomoMSG_c24134_g1_i1
348bp
 28S_ribosomal_protein_S22,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
3317 O_BomoMSG12987_5prime_partial:A_BomoMSG_c24134_g1_i2
176bp
 28S_ribosomal_protein_S22,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
3318 O_BomoMSG12988_complete:A_BomoMSG_c24134_g1_i3
379bp
 28S_ribosomal_protein_S22,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
3319 O_BomoMSG12989_complete:A_BomoMSG_c24136_g1_i1
1372bp
 PREDICTED:_RRP12-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0048812 P neuron projection morphogenesis
3320 O_BomoMSG1298_3prime_partial:A_BomoMSG_c5926_g1_i1
121bp
 mucin-5AC_isoform_X4_[Bombyx_mori]
3321 O_BomoMSG12990_complete:A_BomoMSG_c24136_g1_i1
153bp
3322 O_BomoMSG12991_complete:A_BomoMSG_c24136_g1_i1
120bp
3323 O_BomoMSG12992_complete:A_BomoMSG_c24136_g1_i1
113bp
3324 O_BomoMSG12993_complete:A_BomoMSG_c24136_g1_i1
113bp
3325 O_BomoMSG12994_complete:A_BomoMSG_c24136_g1_i1
112bp
3326 O_BomoMSG12995_5prime_partial:A_BomoMSG_c24136_g1_i2
157bp
 RRP12-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0048812 P neuron projection morphogenesis
3327 O_BomoMSG12996_internal:A_BomoMSG_c24138_g1_i1
268bp
 7-methylguanosine_phosphate-specific_5'-nucleotidase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008252 F nucleotidase activity
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0009158 P ribonucleoside monophosphate catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:1901069 P guanosine-containing compound catabolic process
3328 O_BomoMSG12997_3prime_partial:A_BomoMSG_c24138_g1_i2
251bp
 7-methylguanosine_phosphate-specific_5'-nucleotidase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008252 F nucleotidase activity
GO:0008253 F 5'-nucleotidase activity
GO:0009117 P nucleotide metabolic process
GO:0009158 P ribonucleoside monophosphate catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:1901069 P guanosine-containing compound catabolic process
3329 O_BomoMSG12998_5prime_partial:A_BomoMSG_c24139_g1_i1
137bp
3330 O_BomoMSG12999_5prime_partial:A_BomoMSG_c24139_g1_i2
146bp
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