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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3271 O_BomoMSG12945_5prime_partial:A_BomoMSG_c24124_g1_i3
123bp
3272 O_BomoMSG12946_internal:A_BomoMSG_c24125_g1_i1
460bp
 protein_suppressor_of_forked_isoform_X1_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016070 P RNA metabolic process
GO:0031123 P RNA 3'-end processing
GO:1903220 P positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity
3273 O_BomoMSG12947_5prime_partial:A_BomoMSG_c24125_g1_i1
271bp
 hypothetical_protein_ALC57_04308,_partial_[Trachymyrmex_cornetzi]
3274 O_BomoMSG12948_3prime_partial:A_BomoMSG_c24125_g1_i1
193bp
3275 O_BomoMSG12949_5prime_partial:A_BomoMSG_c24125_g1_i1
118bp
3276 O_BomoMSG1294_internal:A_BomoMSG_c5923_g1_i1
104bp
 uncharacterized_protein_LOC101742154_isoform_X2_[Bombyx_mori]
3277 O_BomoMSG12950_internal:A_BomoMSG_c24125_g1_i2
143bp
 protein_suppressor_of_forked_isoform_X2_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016070 P RNA metabolic process
GO:0031123 P RNA 3'-end processing
GO:1903220 P positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity
3278 O_BomoMSG12951_internal:A_BomoMSG_c24125_g1_i2
142bp
3279 O_BomoMSG12952_5prime_partial:A_BomoMSG_c24125_g1_i2
118bp
3280 O_BomoMSG12953_3prime_partial:A_BomoMSG_c24126_g1_i1
324bp
 decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
3281 O_BomoMSG12954_internal:A_BomoMSG_c24126_g1_i2
226bp
 decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
3282 O_BomoMSG12955_complete:A_BomoMSG_c24128_g1_i1
472bp
 serine/threonine-protein_kinase_ULK3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046777 P protein autophosphorylation
3283 O_BomoMSG12956_complete:A_BomoMSG_c24128_g1_i1
209bp
3284 O_BomoMSG12957_complete:A_BomoMSG_c24128_g1_i1
146bp
3285 O_BomoMSG12958_complete:A_BomoMSG_c24128_g1_i3
340bp
 serine/threonine-protein_kinase_ULK3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046777 P protein autophosphorylation
3286 O_BomoMSG12959_complete:A_BomoMSG_c24128_g1_i3
146bp
3287 O_BomoMSG1295_internal:A_BomoMSG_c5923_g1_i1
104bp
3288 O_BomoMSG12960_complete:A_BomoMSG_c24128_g1_i3
104bp
3289 O_BomoMSG12961_complete:A_BomoMSG_c24128_g1_i4
201bp
 serine/threonine-protein_kinase_ULK3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046777 P protein autophosphorylation
3290 O_BomoMSG12962_complete:A_BomoMSG_c24128_g1_i4
146bp
3291 O_BomoMSG12963_3prime_partial:A_BomoMSG_c24128_g1_i5
145bp
 serine/threonine-protein_kinase_ULK3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0008150 P biological_process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046777 P protein autophosphorylation
3292 O_BomoMSG12964_5prime_partial:A_BomoMSG_c24128_g1_i5
126bp
3293 O_BomoMSG12965_5prime_partial:A_BomoMSG_c24129_g1_i1
627bp
 phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031982 C vesicle
GO:0035005 F 1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0035091 F phosphatidylinositol binding
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
3294 O_BomoMSG12966_complete:A_BomoMSG_c24129_g1_i1
210bp
3295 O_BomoMSG12967_complete:A_BomoMSG_c24129_g1_i1
152bp
 U2_snRNP-associated_SURP_motif-containing_protein_[Trichinella_pseudospiralis]
3296 O_BomoMSG12968_complete:A_BomoMSG_c24129_g1_i3
208bp
 phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031982 C vesicle
GO:0035005 F 1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0035091 F phosphatidylinositol binding
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
3297 O_BomoMSG12969_5prime_partial:A_BomoMSG_c24130_g1_i1
330bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3298 O_BomoMSG1296_internal:A_BomoMSG_c5924_g1_i1
101bp
 xanthine_dehydrogenase_[Bombyx_mori]
3299 O_BomoMSG12970_complete:A_BomoMSG_c24130_g1_i1
164bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
3300 O_BomoMSG12971_5prime_partial:A_BomoMSG_c24130_g1_i2
347bp
 uncharacterized_protein_LOC105841592_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
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