Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2911	O_BomoMSG12620_5prime_partial:A_BomoMSG_c23914_g1_i4 111bp	Bomo_Chr4	arf-GAP_domain_and_FG_repeat-containing_protein_1_isoform_X1_[Bombyx_mori]
2912	O_BomoMSG12621_3prime_partial:A_BomoMSG_c23917_g1_i1 912bp	Bomo_Chr4	MPN_domain-containing_protein_CG4751_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0006508 P proteolysis GO:0008150 P biological_process GO:0008233 F peptidase activity GO:0016787 F hydrolase activity
2913	O_BomoMSG12622_5prime_partial:A_BomoMSG_c23919_g1_i1 120bp	Bomo_Chr17	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
2914	O_BomoMSG12623_5prime_partial:A_BomoMSG_c23919_g2_i1 211bp	Bomo_Chr17	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
2915	O_BomoMSG12624_5prime_partial:A_BomoMSG_c23919_g2_i1 201bp	Bomo_Chr17
2916	O_BomoMSG12625_3prime_partial:A_BomoMSG_c23920_g1_i1 281bp	Bomo_Chr17	phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_Q_[Bombyx_mori]	GO:0000506 C glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex GO:0005789 C endoplasmic reticulum membrane GO:0005975 P carbohydrate metabolic process GO:0006506 P GPI anchor biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016254 P preassembly of GPI anchor in ER membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
2917	O_BomoMSG12626_internal:A_BomoMSG_c23921_g1_i2 187bp	Bomo_Chr4	uncharacterized_protein_LOC110381463_isoform_X1_[Helicoverpa_armigera]
2918	O_BomoMSG12627_5prime_partial:A_BomoMSG_c23922_g1_i1 416bp	Bomo_Chr20	LOW_QUALITY_PROTEIN:_lipase_1_[Bombyx_mori]	GO:0005576 C extracellular region GO:0006629 P lipid metabolic process GO:0007586 P digestion GO:0016042 P lipid catabolic process GO:0016298 F lipase activity GO:0016787 F hydrolase activity GO:0016788 F hydrolase activity, acting on ester bonds
2919	O_BomoMSG12628_5prime_partial:A_BomoMSG_c23922_g1_i2 389bp	Bomo_Chr20	LOW_QUALITY_PROTEIN:_lipase_1_[Bombyx_mori]	GO:0005576 C extracellular region GO:0006629 P lipid metabolic process GO:0007586 P digestion GO:0016042 P lipid catabolic process GO:0016298 F lipase activity GO:0016787 F hydrolase activity GO:0016788 F hydrolase activity, acting on ester bonds
2920	O_BomoMSG12629_5prime_partial:A_BomoMSG_c23923_g1_i1 177bp	Bomo_Chr26	endonuclease-reverse_transcriptase_[Bombyx_mori]
2921	O_BomoMSG1262_complete:A_BomoMSG_c5708_g1_i1 270bp	Bomo_Chr19	embryonic_development_factor_[Bombyx_mori]	GO:0005515 F protein binding GO:0005764 C lysosome GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006810 P transport GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0007041 P lysosomal transport GO:0015031 P protein transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016192 P vesicle-mediated transport GO:0030163 P protein catabolic process GO:0032940 P secretion by cell
2922	O_BomoMSG12630_3prime_partial:A_BomoMSG_c23923_g1_i1 154bp	Bomo_Chr26	endonuclease-reverse_transcriptase_[Bombyx_mori]	GO:0003964 F RNA-directed DNA polymerase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2923	O_BomoMSG12631_complete:A_BomoMSG_c23924_g1_i1 658bp	Bomo_Chr6	RUN_and_FYVE_domain-containing_protein_2_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0046872 F metal ion binding
2924	O_BomoMSG12632_complete:A_BomoMSG_c23924_g1_i1 135bp	Bomo_Chr6
2925	O_BomoMSG12633_complete:A_BomoMSG_c23924_g1_i2 465bp	Bomo_Chr6	RUN_and_FYVE_domain-containing_protein_2_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0046872 F metal ion binding
2926	O_BomoMSG12634_complete:A_BomoMSG_c23924_g1_i2 135bp	Bomo_Chr6
2927	O_BomoMSG12635_complete:A_BomoMSG_c23925_g1_i1 440bp	Bomo_Chr23	tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]	GO:0001522 P pseudouridine synthesis GO:0003723 F RNA binding GO:0005634 C nucleus GO:0008033 P tRNA processing GO:0009451 P RNA modification GO:0009982 F pseudouridine synthase activity GO:0016853 F isomerase activity
2928	O_BomoMSG12636_5prime_partial:A_BomoMSG_c23925_g1_i1 107bp	Bomo_Chr23
2929	O_BomoMSG12637_5prime_partial:A_BomoMSG_c23925_g1_i2 190bp	Bomo_Chr23	tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]	GO:0001522 P pseudouridine synthesis GO:0003723 F RNA binding GO:0005634 C nucleus GO:0008033 P tRNA processing GO:0009451 P RNA modification GO:0009982 F pseudouridine synthase activity GO:0016853 F isomerase activity
2930	O_BomoMSG12638_5prime_partial:A_BomoMSG_c23925_g1_i2 107bp	Bomo_Chr23
2931	O_BomoMSG12639_3prime_partial:A_BomoMSG_c23926_g1_i1 352bp	Bomo_Chr3	S-adenosylmethionine_decarboxylase_proenzyme_isoform_X1_[Bombyx_mori]	GO:0004014 F adenosylmethionine decarboxylase activity GO:0005829 C cytosol GO:0006557 P S-adenosylmethioninamine biosynthetic process GO:0006596 P polyamine biosynthetic process GO:0006597 P spermine biosynthetic process GO:0008295 P spermidine biosynthetic process GO:0016829 F lyase activity GO:0016831 F carboxy-lyase activity GO:0050829 P defense response to Gram-negative bacterium
2932	O_BomoMSG1263_internal:A_BomoMSG_c5709_g1_i1 101bp	Bomo_Chr15	uncharacterized_protein_LOC101741655_isoform_X2_[Bombyx_mori]
2933	O_BomoMSG12640_5prime_partial:A_BomoMSG_c23926_g1_i1 124bp	Bomo_Chr3
2934	O_BomoMSG12641_internal:A_BomoMSG_c23926_g1_i2 205bp	Bomo_Chr3	S-adenosylmethionine_decarboxylase_proenzyme_isoform_X1_[Bombyx_mori]	GO:0004014 F adenosylmethionine decarboxylase activity GO:0005829 C cytosol GO:0006557 P S-adenosylmethioninamine biosynthetic process GO:0006596 P polyamine biosynthetic process GO:0006597 P spermine biosynthetic process GO:0008295 P spermidine biosynthetic process GO:0016829 F lyase activity GO:0016831 F carboxy-lyase activity GO:0050829 P defense response to Gram-negative bacterium
2935	O_BomoMSG12642_5prime_partial:A_BomoMSG_c23926_g1_i2 124bp	Bomo_Chr3
2936	O_BomoMSG12643_internal:A_BomoMSG_c23927_g1_i1 444bp	Bomo_Chr17	transmembrane_protein_104_homolog_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
2937	O_BomoMSG12644_complete:A_BomoMSG_c23927_g1_i1 148bp	Bomo_Chr17
2938	O_BomoMSG12645_internal:A_BomoMSG_c23927_g1_i2 410bp	Bomo_Chr17	transmembrane_protein_104_homolog_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
2939	O_BomoMSG12646_complete:A_BomoMSG_c23927_g1_i2 148bp	Bomo_Chr17
2940	O_BomoMSG12647_internal:A_BomoMSG_c23927_g1_i3 436bp	Bomo_Chr17	transmembrane_protein_104_homolog_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane