Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2581	O_BomoMSG12323_internal:A_BomoMSG_c23734_g1_i1 639bp	Bomo_Chr15	guanine_nucleotide-releasing_factor_2_isoform_X8_[Bombyx_mori]	GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005088 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007264 P small GTPase mediated signal transduction GO:0007265 P Ras protein signal transduction GO:0007275 P multicellular organism development GO:0007525 P somatic muscle development GO:0016203 P muscle attachment GO:0017034 F guanyl-nucleotide exchange factor activity GO:0017124 F SH3 domain binding GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0045214 P sarcomere organization
2582	O_BomoMSG12324_complete:A_BomoMSG_c23734_g1_i1 132bp	Bomo_Chr15
2583	O_BomoMSG12325_5prime_partial:A_BomoMSG_c23734_g1_i1 126bp	Bomo_Chr15
2584	O_BomoMSG12326_internal:A_BomoMSG_c23734_g1_i2 666bp	Bomo_Chr15	guanine_nucleotide-releasing_factor_2_isoform_X2_[Bombyx_mori]	GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005088 F guanyl-nucleotide exchange factor activity GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007264 P small GTPase mediated signal transduction GO:0007265 P Ras protein signal transduction GO:0007275 P multicellular organism development GO:0007525 P somatic muscle development GO:0016203 P muscle attachment GO:0017034 F guanyl-nucleotide exchange factor activity GO:0017124 F SH3 domain binding GO:0043087 P regulation of GTPase activity GO:0043547 P positive regulation of GTPase activity GO:0045214 P sarcomere organization
2585	O_BomoMSG12327_complete:A_BomoMSG_c23734_g1_i2 159bp	Bomo_Chr15
2586	O_BomoMSG12328_5prime_partial:A_BomoMSG_c23734_g1_i2 126bp	Bomo_Chr15
2587	O_BomoMSG12329_3prime_partial:A_BomoMSG_c23736_g1_i1 171bp	Bomo_Chr23	phosphoglycolate_phosphatase_2_isoform_X1_[Bombyx_mori]	GO:0004674 F protein serine/threonine kinase activity GO:0005829 C cytosol GO:0006468 P protein phosphorylation GO:0008152 P metabolic process GO:0008967 F phosphoglycolate phosphatase activity GO:0009507 C chloroplast GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity
2588	O_BomoMSG1232_internal:A_BomoMSG_c5582_g1_i1 248bp	Bomo_Chr22	rapamycin-insensitive_companion_of_mTOR_[Bombyx_mori]	GO:0001932 P regulation of protein phosphorylation GO:0001938 P positive regulation of endothelial cell proliferation GO:0005515 F protein binding GO:0007275 P multicellular organism development GO:0008047 F enzyme activator activity GO:0009790 P embryo development GO:0010468 P regulation of gene expression GO:0018105 P peptidyl-serine phosphorylation GO:0019901 F protein kinase binding GO:0030838 P positive regulation of actin filament polymerization GO:0030950 P establishment or maintenance of actin cytoskeleton polarity GO:0031532 P actin cytoskeleton reorganization GO:0031929 P TOR signaling GO:0031932 C TORC2 complex GO:0032008 P positive regulation of TOR signaling GO:0032956 P regulation of actin cytoskeleton organization GO:0033135 P regulation of peptidyl-serine phosphorylation GO:0042325 P regulation of phosphorylation GO:0043022 F ribosome binding GO:0043085 P positive regulation of catalytic activity GO:0043087 P regulation of GTPase activity GO:0050727 P regulation of inflammatory response GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation GO:0051896 P regulation of protein kinase B signaling GO:0051897 P positive regulation of protein kinase B signaling GO:2000114 P regulation of establishment of cell polarity
2589	O_BomoMSG12330_internal:A_BomoMSG_c23736_g1_i3 110bp	Bomo_Chr23	phosphoglycolate_phosphatase_1B,_chloroplastic_isoform_X2_[Bombyx_mori]
2590	O_BomoMSG12331_complete:A_BomoMSG_c23737_g1_i1 102bp	Bomo_Chr11
2591	O_BomoMSG12332_3prime_partial:A_BomoMSG_c23738_g1_i1 492bp	Bomo_Chr5	serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0031047 P gene silencing by RNA GO:0031053 P primary miRNA processing
2592	O_BomoMSG12333_internal:A_BomoMSG_c23738_g1_i2 453bp	Bomo_Chr5	serrate_RNA_effector_molecule_homolog_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0031047 P gene silencing by RNA GO:0031053 P primary miRNA processing
2593	O_BomoMSG12334_internal:A_BomoMSG_c23738_g1_i3 627bp	Bomo_Chr5	serrate_RNA_effector_molecule_homolog_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0031047 P gene silencing by RNA GO:0031053 P primary miRNA processing
2594	O_BomoMSG12335_internal:A_BomoMSG_c23739_g1_i1 235bp	Bomo_Chr13	zinc_finger_matrin-type_protein_CG9776_isoform_X2_[Bombyx_mori]
2595	O_BomoMSG12336_5prime_partial:A_BomoMSG_c23739_g1_i1 155bp	Bomo_Chr13
2596	O_BomoMSG12337_internal:A_BomoMSG_c23739_g1_i3 216bp	Bomo_Chr13	zinc_finger_matrin-type_protein_CG9776_isoform_X2_[Bombyx_mori]
2597	O_BomoMSG12338_5prime_partial:A_BomoMSG_c23739_g1_i3 155bp	Bomo_Chr13
2598	O_BomoMSG12339_internal:A_BomoMSG_c23741_g1_i1 179bp	Bomo_Chr17	mitochondrial_uncoupling_protein_4_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006091 P generation of precursor metabolites and energy GO:0006412 P translation GO:0006810 P transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2599	O_BomoMSG1233_internal:A_BomoMSG_c5584_g1_i1 204bp	Bomo_Chr6
2600	O_BomoMSG12340_3prime_partial:A_BomoMSG_c23741_g1_i2 297bp	Bomo_Chr17	mitochondrial_uncoupling_protein_4_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006091 P generation of precursor metabolites and energy GO:0006412 P translation GO:0006810 P transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2601	O_BomoMSG12341_3prime_partial:A_BomoMSG_c23741_g1_i3 297bp	Bomo_Chr17	mitochondrial_uncoupling_protein_4_[Bombyx_mori]	GO:0003735 F structural constituent of ribosome GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0006091 P generation of precursor metabolites and energy GO:0006412 P translation GO:0006810 P transport GO:0015992 P proton transmembrane transport GO:0016020 C membrane GO:0016021 C integral component of membrane
2602	O_BomoMSG12342_complete:A_BomoMSG_c23742_g1_i1 270bp	Bomo_Chr20	uncharacterized_protein_LOC101737294_[Bombyx_mori]
2603	O_BomoMSG12343_complete:A_BomoMSG_c23743_g1_i1 377bp	Bomo_Chr11	c-myc_[Bombyx_mori]	GO:0001558 P regulation of cell growth GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008283 P cell population proliferation GO:0008361 P regulation of cell size GO:0009792 P embryo development ending in birth or egg hatching GO:0009880 P embryonic pattern specification GO:0010506 P regulation of autophagy GO:0010906 P regulation of glucose metabolic process GO:0022008 P neurogenesis GO:0030307 P positive regulation of cell growth GO:0035212 P cell competition in a multicellular organism GO:0035363 C histone locus body GO:0040018 P positive regulation of multicellular organism growth GO:0042023 P DNA endoreduplication GO:0042594 P response to starvation GO:0042981 P regulation of apoptotic process GO:0043234 C protein-containing complex GO:0043565 F sequence-specific DNA binding GO:0044719 P regulation of imaginal disc-derived wing size GO:0045572 P positive regulation of imaginal disc growth GO:0045746 P negative regulation of Notch signaling pathway GO:0045793 P positive regulation of cell size GO:0045893 P positive regulation of transcription, DNA-templated GO:0045927 P positive regulation of growth GO:0046620 P regulation of organ growth GO:0046983 F protein dimerization activity GO:0048477 P oogenesis GO:0048639 P positive regulation of developmental growth GO:0050769 P positive regulation of neurogenesis GO:0051726 P regulation of cell cycle GO:0055088 P lipid homeostasis GO:0090062 P regulation of trehalose metabolic process GO:0090277 P positive regulation of peptide hormone secretion
2604	O_BomoMSG12344_complete:A_BomoMSG_c23743_g1_i1 135bp	Bomo_Chr11
2605	O_BomoMSG12345_internal:A_BomoMSG_c23744_g1_i1 386bp	Bomo_Chr25	alanine--tRNA_ligase,_mitochondrial_isoform_X1_[Bombyx_mori]	GO:0000049 F tRNA binding GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004813 F alanine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0006400 P tRNA modification GO:0006412 P translation GO:0006419 P alanyl-tRNA aminoacylation GO:0016597 F amino acid binding GO:0016874 F ligase activity GO:0016876 F aminoacyl-tRNA ligase activity GO:0019233 P sensory perception of pain GO:0043039 P tRNA aminoacylation GO:0046872 F metal ion binding
2606	O_BomoMSG12346_internal:A_BomoMSG_c23746_g2_i1 447bp	Bomo_Chr16	uncharacterized_protein_LOC101742695_[Bombyx_mori]	GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0002244 P hematopoietic progenitor cell differentiation GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0030097 P hemopoiesis GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0060712 P spongiotrophoblast layer development
2607	O_BomoMSG12347_complete:A_BomoMSG_c23747_g1_i1 148bp	Bomo_Chr25	mitochondrial_intermembrane_space_import_and_assembly_protein_40_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0005758 C mitochondrial intermembrane space GO:0006810 P transport GO:0015031 P protein transport GO:0015035 F protein-disulfide reductase activity GO:0016491 F oxidoreductase activity GO:0022417 P protein maturation by protein folding GO:0045041 P protein import into mitochondrial intermembrane space GO:0051084 P 'de novo' posttranslational protein folding GO:0055114 P obsolete oxidation-reduction process
2608	O_BomoMSG12348_5prime_partial:A_BomoMSG_c23748_g1_i1 214bp	Bomo_Chr4	coiled-coil_and_C2_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
2609	O_BomoMSG12349_complete:A_BomoMSG_c23748_g1_i1 116bp	Bomo_Chr4
2610	O_BomoMSG1234_5prime_partial:A_BomoMSG_c5584_g1_i1 181bp	Bomo_Chr6	endothelial_zinc_finger_protein_induced_by_tumor_necrosis_factor_alpha-like_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0046872 F metal ion binding