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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2521 O_BomoMSG1226_5prime_partial:A_BomoMSG_c5575_g1_i1
104bp
2522 O_BomoMSG12270_5prime_partial:A_BomoMSG_c23701_g1_i3
387bp
 WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
2523 O_BomoMSG12271_5prime_partial:A_BomoMSG_c23701_g1_i4
447bp
 WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
2524 O_BomoMSG12272_internal:A_BomoMSG_c23702_g1_i1
463bp
 uncharacterized_protein_LOC101737598_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
2525 O_BomoMSG12273_internal:A_BomoMSG_c23702_g1_i2
246bp
 uncharacterized_protein_LOC101737598_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0090630 P activation of GTPase activity
GO:1901096 P regulation of autophagosome maturation
2526 O_BomoMSG12274_3prime_partial:A_BomoMSG_c23703_g1_i2
274bp
 cysteine_and_histidine-rich_protein_1-B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
2527 O_BomoMSG12275_5prime_partial:A_BomoMSG_c23703_g1_i2
135bp
2528 O_BomoMSG12276_3prime_partial:A_BomoMSG_c23704_g1_i1
416bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2529 O_BomoMSG12277_complete:A_BomoMSG_c23704_g1_i1
119bp
 PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]
2530 O_BomoMSG12278_3prime_partial:A_BomoMSG_c23705_g1_i1
415bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X1_[Bombyx_mori]
GO:0001756 P somitogenesis
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0031417 C NatC complex
GO:0032006 P regulation of TOR signaling
GO:0043066 P negative regulation of apoptotic process
GO:0048514 P blood vessel morphogenesis
GO:0048659 P smooth muscle cell proliferation
2531 O_BomoMSG12279_internal:A_BomoMSG_c23705_g1_i2
220bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X2_[Bombyx_mori]
GO:0001756 P somitogenesis
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0031417 C NatC complex
GO:0032006 P regulation of TOR signaling
GO:0043066 P negative regulation of apoptotic process
GO:0048514 P blood vessel morphogenesis
GO:0048659 P smooth muscle cell proliferation
2532 O_BomoMSG1227_internal:A_BomoMSG_c5578_g2_i1
106bp
 enzymatic_polyprotein_endonuclease_reverse_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2533 O_BomoMSG12280_3prime_partial:A_BomoMSG_c23710_g1_i1
154bp
 kinase_D-interacting_substrate_of_220_kDa_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019887 F protein kinase regulator activity
GO:0030165 F PDZ domain binding
GO:0038180 P nerve growth factor signaling pathway
GO:0045859 P regulation of protein kinase activity
2534 O_BomoMSG12281_internal:A_BomoMSG_c23710_g1_i2
489bp
 kinase_D-interacting_substrate_of_220_kDa_isoform_X2_[Bombyx_mori]
GO:0000186 P obsolete activation of MAPKK activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0030165 F PDZ domain binding
GO:0038180 P nerve growth factor signaling pathway
GO:0043234 C protein-containing complex
GO:1990090 P cellular response to nerve growth factor stimulus
2535 O_BomoMSG12282_5prime_partial:A_BomoMSG_c23711_g1_i1
408bp
 tropomodulin-1_isoform_X6_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030835 P negative regulation of actin filament depolymerization
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0071689 P muscle thin filament assembly
GO:1990357 C terminal web
2536 O_BomoMSG12283_complete:A_BomoMSG_c23711_g1_i1
113bp
2537 O_BomoMSG12284_complete:A_BomoMSG_c23711_g1_i1
101bp
2538 O_BomoMSG12285_5prime_partial:A_BomoMSG_c23711_g1_i2
396bp
 tropomodulin-1_isoform_X7_[Bombyx_mori]
GO:0002119 P nematode larval development
GO:0003779 F actin binding
GO:0005523 F tropomyosin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030835 P negative regulation of actin filament depolymerization
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051015 F actin filament binding
GO:0051694 P pointed-end actin filament capping
GO:0071689 P muscle thin filament assembly
GO:1990357 C terminal web
2539 O_BomoMSG12286_complete:A_BomoMSG_c23711_g1_i2
113bp
2540 O_BomoMSG12287_complete:A_BomoMSG_c23711_g1_i2
101bp
2541 O_BomoMSG12288_complete:A_BomoMSG_c23713_g1_i2
226bp
 ras-related_protein_Rab-31_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031623 P receptor internalization
GO:0032588 C trans-Golgi network membrane
GO:0032869 P cellular response to insulin stimulus
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045055 P regulated exocytosis
GO:0045335 C phagocytic vesicle
GO:0048193 P Golgi vesicle transport
GO:0090382 P phagosome maturation
2542 O_BomoMSG12289_internal:A_BomoMSG_c23714_g1_i1
319bp
 GPI_ethanolamine_phosphate_transferase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0051377 F mannose-ethanolamine phosphotransferase activity
2543 O_BomoMSG1228_internal:A_BomoMSG_c5580_g1_i1
134bp
 E3_ubiquitin-protein_ligase_UBR3-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
2544 O_BomoMSG12290_5prime_partial:A_BomoMSG_c23715_g1_i1
459bp
 uncharacterized_protein_LOC101743084_isoform_X2_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030027 C lamellipodium
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036312 F phosphatidylinositol 3-kinase regulatory subunit binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0044297 C cell body
GO:0070062 C extracellular exosome
2545 O_BomoMSG12291_5prime_partial:A_BomoMSG_c23715_g1_i2
397bp
 uncharacterized_protein_LOC101743084_isoform_X2_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030027 C lamellipodium
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036312 F phosphatidylinositol 3-kinase regulatory subunit binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0044297 C cell body
GO:0070062 C extracellular exosome
2546 O_BomoMSG12292_internal:A_BomoMSG_c23716_g1_i1
164bp
 uncharacterized_protein_LOC101738706_isoform_X2_[Bombyx_mori]
2547 O_BomoMSG12293_3prime_partial:A_BomoMSG_c23716_g1_i2
427bp
 uncharacterized_protein_LOC101738706_isoform_X2_[Bombyx_mori]
GO:0000003 P reproduction
GO:0001764 P neuron migration
GO:0005604 C basement membrane
GO:0007155 P cell adhesion
GO:0007414 P axonal defasciculation
GO:0009408 P response to heat
GO:0010950 P positive regulation of endopeptidase activity
GO:0016477 P cell migration
GO:0040017 P positive regulation of locomotion
GO:0042127 P regulation of cell population proliferation
GO:0051788 P response to misfolded protein
GO:0071711 P basement membrane organization
2548 O_BomoMSG12294_internal:A_BomoMSG_c23716_g1_i3
190bp
 uncharacterized_protein_LOC101738706_isoform_X2_[Bombyx_mori]
2549 O_BomoMSG12295_5prime_partial:A_BomoMSG_c23717_g1_i3
159bp
2550 O_BomoMSG12296_5prime_partial:A_BomoMSG_c23717_g1_i3
149bp
 1-phosphatidylinositol_3-phosphate_5-kinase_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0034504 P protein localization to nucleus
GO:0035556 P intracellular signal transduction
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0045121 C membrane raft
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:1904562 P phosphatidylinositol 5-phosphate metabolic process
GO:2000785 P regulation of autophagosome assembly
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