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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2191 O_BomoMSG11973_5prime_partial:A_BomoMSG_c23548_g1_i1
171bp
2192 O_BomoMSG11974_5prime_partial:A_BomoMSG_c23548_g1_i1
106bp
2193 O_BomoMSG11975_internal:A_BomoMSG_c23549_g1_i1
347bp
 PREDICTED:_thyroid_adenoma-associated_protein_homolog_isoform_X3_[Papilio_xuthus]
2194 O_BomoMSG11976_complete:A_BomoMSG_c23549_g1_i1
146bp
2195 O_BomoMSG11977_internal:A_BomoMSG_c23549_g1_i2
372bp
 PREDICTED:_thyroid_adenoma-associated_protein_homolog_isoform_X3_[Papilio_xuthus]
2196 O_BomoMSG11978_complete:A_BomoMSG_c23549_g1_i2
146bp
2197 O_BomoMSG11979_internal:A_BomoMSG_c23549_g1_i3
455bp
 PREDICTED:_thyroid_adenoma-associated_protein_homolog_isoform_X3_[Papilio_xuthus]
2198 O_BomoMSG1197_internal:A_BomoMSG_c5513_g1_i1
141bp
 PREDICTED:_adenylate_kinase_9_isoform_X2_[Amyelois_transitella]
2199 O_BomoMSG11980_complete:A_BomoMSG_c23549_g1_i3
146bp
2200 O_BomoMSG11981_internal:A_BomoMSG_c23550_g1_i1
256bp
 lipoamide_acyltransferase_component_of_branched-chain_alpha-keto_acid_dehydrogenase_complex,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0043754 F dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
2201 O_BomoMSG11982_internal:A_BomoMSG_c23550_g1_i2
176bp
 lipoamide_acyltransferase_component_of_branched-chain_alpha-keto_acid_dehydrogenase_complex,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0043754 F dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
2202 O_BomoMSG11983_complete:A_BomoMSG_c23551_g1_i1
226bp
 tetraspanin-31-B_isoform_X1_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2203 O_BomoMSG11984_internal:A_BomoMSG_c23552_g1_i1
612bp
 protein_mini_spindles_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000922 C spindle pole
GO:0000930 C gamma-tubulin complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity
GO:0035371 C microtubule plus-end
GO:0043234 C protein-containing complex
GO:0050658 P RNA transport
GO:0051297 P centrosome cycle
GO:0051301 P cell division
2204 O_BomoMSG11985_complete:A_BomoMSG_c23552_g1_i1
136bp
2205 O_BomoMSG11986_complete:A_BomoMSG_c23552_g1_i1
102bp
2206 O_BomoMSG11987_complete:A_BomoMSG_c23553_g1_i1
257bp
 uncharacterized_protein_LOC101735432_[Bombyx_mori]
2207 O_BomoMSG11988_complete:A_BomoMSG_c23553_g1_i1
168bp
2208 O_BomoMSG11989_complete:A_BomoMSG_c23553_g1_i2
257bp
 uncharacterized_protein_LOC101735432_[Bombyx_mori]
2209 O_BomoMSG1198_3prime_partial:A_BomoMSG_c5514_g1_i1
147bp
 pre-mRNA-splicing_factor_CWC25-like_[Bombyx_mori]
2210 O_BomoMSG11990_complete:A_BomoMSG_c23553_g1_i2
168bp
2211 O_BomoMSG11991_complete:A_BomoMSG_c23555_g1_i1
325bp
 GDP-L-fucose_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016853 F isomerase activity
GO:0019673 P GDP-mannose metabolic process
GO:0019835 P cytolysis
GO:0042351 P 'de novo' GDP-L-fucose biosynthetic process
GO:0050577 F GDP-L-fucose synthase activity
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
2212 O_BomoMSG11992_5prime_partial:A_BomoMSG_c23558_g1_i1
363bp
 ubiquitin-like_domain-containing_CTD_phosphatase_1_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
2213 O_BomoMSG11993_complete:A_BomoMSG_c23558_g1_i1
110bp
2214 O_BomoMSG11994_5prime_partial:A_BomoMSG_c23558_g1_i2
363bp
 ubiquitin-like_domain-containing_CTD_phosphatase_1_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005634 C nucleus
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
2215 O_BomoMSG11995_complete:A_BomoMSG_c23558_g1_i2
110bp
2216 O_BomoMSG11996_complete:A_BomoMSG_c23561_g1_i1
488bp
 equilibrative_nucleoside_transporter_2_[Bombyx_mori]
GO:0005337 F nucleoside transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006810 P transport
GO:0007595 P lactation
GO:0015858 P nucleoside transport
GO:0015862 P uridine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0030431 P sleep
GO:0060079 P excitatory postsynaptic potential
GO:0071333 P cellular response to glucose stimulus
GO:0071456 P cellular response to hypoxia
GO:0098794 C postsynapse
GO:1901642 P nucleoside transmembrane transport
2217 O_BomoMSG11997_complete:A_BomoMSG_c23561_g1_i1
134bp
2218 O_BomoMSG11998_complete:A_BomoMSG_c23562_g1_i1
285bp
 pleckstrin_homology_domain-containing_family_F_member_2_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030133 C transport vesicle
GO:0031901 C early endosome membrane
GO:0046872 F metal ion binding
2219 O_BomoMSG11999_complete:A_BomoMSG_c23562_g1_i1
143bp
2220 O_BomoMSG1199_complete:A_BomoMSG_c5514_g1_i1
107bp
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