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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoMSG10190_3prime_partial:A_BomoMSG_c22506_g1_i3
115bp
 MSL2_protein_[Bombyx_mori]
212 O_BomoMSG10191_5prime_partial:A_BomoMSG_c22508_g1_i1
146bp
 putative_epidermal_cell_surface_receptor_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0004872 F signaling receptor activity
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
213 O_BomoMSG10192_5prime_partial:A_BomoMSG_c22511_g1_i1
153bp
 Ssu72_RNA_polymerase_II_CTD_phosphatase_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
214 O_BomoMSG10193_complete:A_BomoMSG_c22511_g1_i2
193bp
 Ssu72_RNA_polymerase_II_CTD_phosphatase_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
215 O_BomoMSG10194_5prime_partial:A_BomoMSG_c22512_g1_i1
190bp
 peptidyl-prolyl_cis-trans_isomerase_G-like_[Bombyx_mori]
216 O_BomoMSG10195_5prime_partial:A_BomoMSG_c22512_g1_i1
161bp
217 O_BomoMSG10196_complete:A_BomoMSG_c22512_g1_i1
133bp
218 O_BomoMSG10197_3prime_partial:A_BomoMSG_c22512_g1_i1
109bp
219 O_BomoMSG10198_internal:A_BomoMSG_c22513_g1_i1
256bp
 uncharacterized_protein_LOC101742950_[Bombyx_mori]
220 O_BomoMSG10199_internal:A_BomoMSG_c22513_g1_i2
109bp
 uncharacterized_protein_LOC101742950_[Bombyx_mori]
221 O_BomoMSG1019_complete:A_BomoMSG_c4722_g1_i1
572bp
 EN_protein_binding/engrailed_nuclear_homeoprotein-regulated_protein_[Bombyx_mori]
222 O_BomoMSG101_internal:A_BomoMSG_c368_g1_i1
109bp
 neurogenic_protein_mastermind_[Bombyx_mori]
223 O_BomoMSG10200_internal:A_BomoMSG_c22513_g1_i3
351bp
 uncharacterized_protein_LOC101742950_[Bombyx_mori]
224 O_BomoMSG10201_3prime_partial:A_BomoMSG_c22513_g1_i3
101bp
225 O_BomoMSG10202_3prime_partial:A_BomoMSG_c22515_g1_i1
152bp
 LIM_domain_transcription_factor_LMO4_[Bombyx_mori]
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001843 P neural tube closure
GO:0003281 P ventricular septum development
GO:0005515 F protein binding
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0021514 P ventral spinal cord interneuron differentiation
GO:0021522 P spinal cord motor neuron differentiation
GO:0021527 P spinal cord association neuron differentiation
GO:0030334 P regulation of cell migration
GO:0031252 C cell leading edge
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0033674 P positive regulation of kinase activity
GO:0042659 P regulation of cell fate specification
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048538 P thymus development
GO:0050865 P regulation of cell activation
226 O_BomoMSG10203_3prime_partial:A_BomoMSG_c22515_g1_i1
112bp
 putative_LIM_domain_transcription_factor_LMO4,_partial_[Operophtera_brumata]
227 O_BomoMSG10204_internal:A_BomoMSG_c22516_g1_i1
157bp
 pre-piRNA_3'-exonuclease_trimmer-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
228 O_BomoMSG10205_3prime_partial:A_BomoMSG_c22516_g1_i2
132bp
 pre-piRNA_3'-exonuclease_trimmer-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
229 O_BomoMSG10206_internal:A_BomoMSG_c22518_g1_i1
164bp
 survivin-1_[Bombyx_mori]
230 O_BomoMSG10207_3prime_partial:A_BomoMSG_c22518_g1_i1
111bp
231 O_BomoMSG10208_5prime_partial:A_BomoMSG_c22520_g1_i1
429bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
232 O_BomoMSG10209_5prime_partial:A_BomoMSG_c22520_g1_i3
460bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
233 O_BomoMSG1020_complete:A_BomoMSG_c4722_g1_i1
126bp
234 O_BomoMSG10210_internal:A_BomoMSG_c22521_g1_i1
243bp
 uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
235 O_BomoMSG10211_3prime_partial:A_BomoMSG_c22521_g1_i2
349bp
 uncharacterized_protein_LOC101744657_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0042594 P response to starvation
GO:0044351 P macropinocytosis
236 O_BomoMSG10212_internal:A_BomoMSG_c22524_g1_i1
316bp
 tetratricopeptide_repeat_protein_17_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0030041 P actin filament polymerization
GO:0044782 P cilium organization
237 O_BomoMSG10213_3prime_partial:A_BomoMSG_c22527_g1_i1
438bp
 tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
238 O_BomoMSG10214_5prime_partial:A_BomoMSG_c22527_g1_i1
137bp
239 O_BomoMSG10215_internal:A_BomoMSG_c22527_g1_i2
425bp
 tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
240 O_BomoMSG10216_5prime_partial:A_BomoMSG_c22527_g1_i2
137bp
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