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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
181 O_BomoMSG10163_complete:A_BomoMSG_c22499_g1_i2
152bp
 RNA-binding_protein_cabeza_isoform_X1_[Bombyx_mori]
182 O_BomoMSG10164_complete:A_BomoMSG_c22499_g1_i2
133bp
 RNA-binding_protein_cabeza_isoform_X2_[Bombyx_mori]
183 O_BomoMSG10165_5prime_partial:A_BomoMSG_c22499_g1_i3
262bp
 RNA-binding_protein_cabeza_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0035327 C euchromatin
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0071013 C catalytic step 2 spliceosome
184 O_BomoMSG10166_complete:A_BomoMSG_c22499_g1_i3
180bp
 RNA-binding_protein_cabeza_isoform_X1_[Bombyx_mori]
185 O_BomoMSG10167_5prime_partial:A_BomoMSG_c22500_g1_i1
281bp
 probable_protein_phosphatase_2C_11_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0043169 F cation binding
GO:0046872 F metal ion binding
186 O_BomoMSG10168_5prime_partial:A_BomoMSG_c22501_g1_i1
503bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
187 O_BomoMSG10169_5prime_partial:A_BomoMSG_c22501_g1_i1
243bp
188 O_BomoMSG1016_internal:A_BomoMSG_c4715_g1_i1
133bp
 GTPase_[Danaus_plexippus_plexippus]
189 O_BomoMSG10170_complete:A_BomoMSG_c22501_g1_i1
190bp
190 O_BomoMSG10171_complete:A_BomoMSG_c22501_g1_i1
161bp
191 O_BomoMSG10172_5prime_partial:A_BomoMSG_c22501_g1_i1
152bp
192 O_BomoMSG10173_5prime_partial:A_BomoMSG_c22501_g1_i2
507bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
193 O_BomoMSG10174_5prime_partial:A_BomoMSG_c22501_g1_i2
243bp
194 O_BomoMSG10175_complete:A_BomoMSG_c22501_g1_i2
190bp
195 O_BomoMSG10176_complete:A_BomoMSG_c22501_g1_i2
161bp
196 O_BomoMSG10177_5prime_partial:A_BomoMSG_c22501_g1_i2
152bp
197 O_BomoMSG10178_complete:A_BomoMSG_c22501_g1_i2
103bp
198 O_BomoMSG10179_3prime_partial:A_BomoMSG_c22501_g1_i3
155bp
199 O_BomoMSG1017_3prime_partial:A_BomoMSG_c4720_g1_i1
115bp
 inositol-3-phosphate_synthase_[Bombyx_mori]
GO:0004512 F inositol-3-phosphate synthase activity
GO:0005737 C cytoplasm
GO:0006021 P inositol biosynthetic process
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016853 F isomerase activity
200 O_BomoMSG10180_5prime_partial:A_BomoMSG_c22501_g1_i3
146bp
 AP-3_complex_subunit_beta-2_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
201 O_BomoMSG10181_3prime_partial:A_BomoMSG_c22501_g1_i3
135bp
202 O_BomoMSG10182_complete:A_BomoMSG_c22503_g1_i1
319bp
 RAB6-interacting_golgin_[Helicoverpa_armigera]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
203 O_BomoMSG10183_complete:A_BomoMSG_c22504_g1_i1
217bp
 serine/threonine-protein_kinase_RIO2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
204 O_BomoMSG10184_5prime_partial:A_BomoMSG_c22504_g1_i1
181bp
205 O_BomoMSG10185_complete:A_BomoMSG_c22504_g1_i2
507bp
 serine/threonine-protein_kinase_RIO2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0008150 P biological_process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
206 O_BomoMSG10186_5prime_partial:A_BomoMSG_c22504_g1_i2
181bp
207 O_BomoMSG10187_complete:A_BomoMSG_c22504_g1_i2
103bp
208 O_BomoMSG10188_internal:A_BomoMSG_c22506_g1_i1
170bp
 MSL2_protein_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0072487 C MSL complex
209 O_BomoMSG10189_3prime_partial:A_BomoMSG_c22506_g1_i2
298bp
 MSL2_protein_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0072487 C MSL complex
210 O_BomoMSG1018_3prime_partial:A_BomoMSG_c4721_g1_i1
162bp
 cell_division_cycle_7-related_protein_kinase_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000727 P double-strand break repair via break-induced replication
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0044770 P cell cycle phase transition
GO:0045171 C intercellular bridge
GO:0046872 F metal ion binding
GO:0051301 P cell division
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