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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2071 O_BomoMSG11865_internal:A_BomoMSG_c23486_g1_i2
140bp
 spectrin_beta_chain_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
2072 O_BomoMSG11866_internal:A_BomoMSG_c23486_g1_i2
140bp
2073 O_BomoMSG11867_complete:A_BomoMSG_c23491_g1_i1
507bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
GO:0046872 F metal ion binding
2074 O_BomoMSG11868_3prime_partial:A_BomoMSG_c23491_g1_i1
248bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2075 O_BomoMSG11869_complete:A_BomoMSG_c23492_g2_i1
190bp
 uncharacterized_protein_LOC101737807_[Bombyx_mori]
2076 O_BomoMSG1186_complete:A_BomoMSG_c5494_g1_i1
123bp
 hypothetical_protein_GGTG_01387_[Gaeumannomyces_tritici_R3-111a-1]
2077 O_BomoMSG11870_internal:A_BomoMSG_c23494_g1_i1
725bp
 uncharacterized_protein_LOC101743229_isoform_X1_[Bombyx_mori]
2078 O_BomoMSG11871_internal:A_BomoMSG_c23496_g1_i2
492bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
2079 O_BomoMSG11872_internal:A_BomoMSG_c23497_g1_i2
123bp
 Gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
2080 O_BomoMSG11873_5prime_partial:A_BomoMSG_c23499_g1_i2
235bp
 NUAK_family_SNF1-like_kinase_1_isoform_X3_[Bombyx_mori]
2081 O_BomoMSG11874_5prime_partial:A_BomoMSG_c23499_g1_i2
120bp
2082 O_BomoMSG11875_5prime_partial:A_BomoMSG_c23499_g1_i3
237bp
 NUAK_family_SNF1-like_kinase_1_isoform_X2_[Bombyx_mori]
2083 O_BomoMSG11876_5prime_partial:A_BomoMSG_c23499_g1_i4
244bp
 NUAK_family_SNF1-like_kinase_1_isoform_X2_[Bombyx_mori]
2084 O_BomoMSG11877_5prime_partial:A_BomoMSG_c23499_g1_i4
120bp
2085 O_BomoMSG11878_complete:A_BomoMSG_c23500_g1_i1
561bp
 putative_pol_protein_[Danaus_plexippus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2086 O_BomoMSG11879_internal:A_BomoMSG_c23501_g1_i1
212bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
2087 O_BomoMSG1187_3prime_partial:A_BomoMSG_c5495_g1_i1
266bp
 myelin_regulatory_factor_isoform_X3_[Bombyx_mori]
2088 O_BomoMSG11880_3prime_partial:A_BomoMSG_c23501_g1_i2
136bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
2089 O_BomoMSG11881_internal:A_BomoMSG_c23501_g2_i1
298bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
2090 O_BomoMSG11882_internal:A_BomoMSG_c23501_g1_i3
422bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
2091 O_BomoMSG11883_internal:A_BomoMSG_c23501_g2_i2
210bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
2092 O_BomoMSG11884_complete:A_BomoMSG_c23505_g1_i1
639bp
 aryl_hydrocarbon_receptor_nuclear_translocator_homolog_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2093 O_BomoMSG11885_complete:A_BomoMSG_c23505_g1_i1
173bp
2094 O_BomoMSG11886_complete:A_BomoMSG_c23505_g1_i1
146bp
2095 O_BomoMSG11887_complete:A_BomoMSG_c23505_g1_i2
635bp
 aryl_hydrocarbon_receptor_nuclear_translocator_homolog_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2096 O_BomoMSG11888_complete:A_BomoMSG_c23505_g1_i2
173bp
2097 O_BomoMSG11889_complete:A_BomoMSG_c23505_g1_i2
146bp
2098 O_BomoMSG1188_internal:A_BomoMSG_c5497_g1_i1
136bp
 pre-piRNA_3'-exonuclease_trimmer-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030097 P hemopoiesis
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
2099 O_BomoMSG11890_5prime_partial:A_BomoMSG_c23505_g1_i3
599bp
 aryl_hydrocarbon_receptor_nuclear_translocator_homolog_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2100 O_BomoMSG11891_complete:A_BomoMSG_c23505_g1_i3
173bp
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