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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_BomoMSG11892_complete:A_BomoMSG_c23505_g1_i3
146bp
2102 O_BomoMSG11893_complete:A_BomoMSG_c23506_g3_i1
108bp
2103 O_BomoMSG11894_5prime_partial:A_BomoMSG_c23507_g1_i1
174bp
 uncharacterized_protein_LOC101737240_[Bombyx_mori]
2104 O_BomoMSG11895_5prime_partial:A_BomoMSG_c23508_g1_i1
153bp
 cysteine-rich_protein_2-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0030274 F LIM domain binding
GO:0043966 P histone H3 acetylation
2105 O_BomoMSG11896_5prime_partial:A_BomoMSG_c23508_g1_i2
680bp
 cysteine-rich_protein_2-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0043966 P histone H3 acetylation
2106 O_BomoMSG11897_5prime_partial:A_BomoMSG_c23508_g1_i3
257bp
 cysteine-rich_protein_2-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0043966 P histone H3 acetylation
2107 O_BomoMSG11898_complete:A_BomoMSG_c23509_g1_i2
316bp
 E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
2108 O_BomoMSG11899_5prime_partial:A_BomoMSG_c23509_g1_i3
211bp
 E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0030318 P melanocyte differentiation
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
2109 O_BomoMSG1189_complete:A_BomoMSG_c5499_g1_i1
314bp
 very-long-chain_3-oxoacyl-CoA_reductase_[Bombyx_mori]
GO:0001968 F fibronectin binding
GO:0003674 F molecular_function
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005518 F collagen binding
GO:0005575 C cellular_component
GO:0005578 C extracellular matrix
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006703 P estrogen biosynthetic process
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008201 F heparin binding
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030198 P extracellular matrix organization
GO:0055114 P obsolete oxidation-reduction process
2110 O_BomoMSG118_internal:A_BomoMSG_c418_g1_i1
110bp
 putative_adaptor_protein_enigma_[Operophtera_brumata]
2111 O_BomoMSG11900_5prime_partial:A_BomoMSG_c23510_g1_i1
108bp
 clavesin-1_[Bombyx_mori]
2112 O_BomoMSG11901_5prime_partial:A_BomoMSG_c23510_g1_i2
161bp
 clavesin-1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
2113 O_BomoMSG11902_internal:A_BomoMSG_c23512_g2_i1
99bp
2114 O_BomoMSG11903_internal:A_BomoMSG_c23512_g2_i1
99bp
 forkhead_box_protein_K1,_partial_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0043565 F sequence-specific DNA binding
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
2115 O_BomoMSG11904_3prime_partial:A_BomoMSG_c23513_g1_i1
414bp
 BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
2116 O_BomoMSG11905_5prime_partial:A_BomoMSG_c23513_g1_i1
207bp
2117 O_BomoMSG11906_complete:A_BomoMSG_c23513_g1_i1
119bp
2118 O_BomoMSG11907_complete:A_BomoMSG_c23513_g1_i1
100bp
2119 O_BomoMSG11908_complete:A_BomoMSG_c23514_g1_i1
112bp
2120 O_BomoMSG11909_5prime_partial:A_BomoMSG_c23514_g2_i1
176bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2121 O_BomoMSG1190_internal:A_BomoMSG_c5500_g1_i1
101bp
 centromere_protein_I_[Bombyx_mori]
2122 O_BomoMSG11910_3prime_partial:A_BomoMSG_c23514_g2_i1
109bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2123 O_BomoMSG11911_5prime_partial:A_BomoMSG_c23515_g1_i1
180bp
 cyclin-G-associated_kinase-like_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
2124 O_BomoMSG11912_complete:A_BomoMSG_c23519_g1_i1
254bp
 UPF0430_protein_CG31712-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2125 O_BomoMSG11913_complete:A_BomoMSG_c23519_g1_i1
191bp
2126 O_BomoMSG11914_complete:A_BomoMSG_c23521_g1_i1
800bp
 peroxidase_isoform_X1_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
2127 O_BomoMSG11915_complete:A_BomoMSG_c23521_g1_i1
121bp
2128 O_BomoMSG11916_complete:A_BomoMSG_c23521_g1_i1
108bp
2129 O_BomoMSG11917_3prime_partial:A_BomoMSG_c23521_g1_i1
103bp
2130 O_BomoMSG11918_3prime_partial:A_BomoMSG_c23522_g1_i2
267bp
 equilibrative_nucleoside_transporter_3_[Bombyx_mori]
GO:0005337 F nucleoside transmembrane transporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006810 P transport
GO:0015858 P nucleoside transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
GO:1901642 P nucleoside transmembrane transport
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