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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
151 O_BomoMSG10136_complete:A_BomoMSG_c22483_g1_i3
107bp
152 O_BomoMSG10137_internal:A_BomoMSG_c22486_g1_i1
119bp
153 O_BomoMSG10138_internal:A_BomoMSG_c22486_g1_i1
118bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
154 O_BomoMSG10139_5prime_partial:A_BomoMSG_c22486_g1_i2
114bp
155 O_BomoMSG1013_internal:A_BomoMSG_c4703_g1_i1
99bp
156 O_BomoMSG10140_5prime_partial:A_BomoMSG_c22490_g1_i1
195bp
 Bm8_interacting_protein_2d-2_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
157 O_BomoMSG10141_complete:A_BomoMSG_c22491_g1_i1
272bp
 eukaryotic_translation_initiation_factor_4H_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0048471 C perinuclear region of cytoplasm
158 O_BomoMSG10142_complete:A_BomoMSG_c22491_g1_i1
128bp
159 O_BomoMSG10143_complete:A_BomoMSG_c22491_g1_i1
119bp
160 O_BomoMSG10144_internal:A_BomoMSG_c22493_g1_i3
151bp
 mothers_against_decapentaplegic_homolog_3_[Bombyx_mori]
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001657 P ureteric bud development
GO:0001701 P in utero embryonic development
GO:0001706 P endoderm formation
GO:0001707 P mesoderm formation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007182 P common-partner SMAD protein phosphorylation
GO:0007183 P SMAD protein complex assembly
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007369 P gastrulation
GO:0007389 P pattern specification process
GO:0007492 P endoderm development
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0009749 P response to glucose
GO:0009791 P post-embryonic development
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0019902 F phosphatase binding
GO:0023019 P signal transduction involved in regulation of gene expression
GO:0030073 P insulin secretion
GO:0030324 P lung development
GO:0030513 P positive regulation of BMP signaling pathway
GO:0030618 F obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity
GO:0031016 P pancreas development
GO:0031625 F ubiquitin protein ligase binding
GO:0032444 C activin responsive factor complex
GO:0032924 P activin receptor signaling pathway
GO:0033613 F DNA-binding transcription factor binding
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035265 P organ growth
GO:0035556 P intracellular signal transduction
GO:0038092 P nodal signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0045165 P cell fate commitment
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048340 P paraxial mesoderm morphogenesis
GO:0048589 P developmental growth
GO:0048617 P embryonic foregut morphogenesis
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0051098 P regulation of binding
GO:0060021 P roof of mouth development
GO:0060039 P pericardium development
GO:0060395 P SMAD protein signal transduction
GO:0070410 F co-SMAD binding
GO:0070411 F I-SMAD binding
GO:0070412 F R-SMAD binding
GO:0070723 P response to cholesterol
GO:0071141 C SMAD protein complex
GO:0071144 C heteromeric SMAD protein complex
GO:1900224 P positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry
161 O_BomoMSG10145_internal:A_BomoMSG_c22493_g1_i4
248bp
 mothers_against_decapentaplegic_homolog_3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000983 F RNA polymerase II general transcription initiation factor activity
GO:0000987 F cis-regulatory region sequence-specific DNA binding
GO:0000988 F obsolete transcription factor activity, protein binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001501 P skeletal system development
GO:0001649 P osteoblast differentiation
GO:0001657 P ureteric bud development
GO:0001666 P response to hypoxia
GO:0001701 P in utero embryonic development
GO:0001707 P mesoderm formation
GO:0001756 P somitogenesis
GO:0001889 P liver development
GO:0001933 P negative regulation of protein phosphorylation
GO:0001947 P heart looping
GO:0002076 P osteoblast development
GO:0002520 P immune system development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006810 P transport
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006955 P immune response
GO:0007050 P regulation of cell cycle
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007183 P SMAD protein complex assembly
GO:0007369 P gastrulation
GO:0007492 P endoderm development
GO:0008013 F beta-catenin binding
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0009880 P embryonic pattern specification
GO:0010628 P positive regulation of gene expression
GO:0010694 P positive regulation of alkaline phosphatase activity
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0016202 P regulation of striated muscle tissue development
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0019049 P mitigation of host defenses by virus
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0019902 F phosphatase binding
GO:0023019 P signal transduction involved in regulation of gene expression
GO:0030308 P negative regulation of cell growth
GO:0030335 P positive regulation of cell migration
GO:0030501 P positive regulation of bone mineralization
GO:0030618 F obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity
GO:0030878 P thyroid gland development
GO:0031490 F chromatin DNA binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032332 P positive regulation of chondrocyte differentiation
GO:0032731 P positive regulation of interleukin-1 beta production
GO:0032909 P regulation of transforming growth factor beta2 production
GO:0032916 P positive regulation of transforming growth factor beta3 production
GO:0032924 P activin receptor signaling pathway
GO:0033689 P negative regulation of osteoblast proliferation
GO:0035413 P positive regulation of canonical Wnt signaling pathway
GO:0035556 P intracellular signal transduction
GO:0038092 P nodal signaling pathway
GO:0042110 P T cell activation
GO:0042177 P negative regulation of protein catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042993 P obsolete positive regulation of transcription factor import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043130 F ubiquitin binding
GO:0043234 C protein-containing complex
GO:0043235 C receptor complex
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045216 P cell-cell junction organization
GO:0045599 P negative regulation of fat cell differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045930 P negative regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048340 P paraxial mesoderm morphogenesis
GO:0048589 P developmental growth
GO:0048617 P embryonic foregut morphogenesis
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050678 P regulation of epithelial cell proliferation
GO:0050728 P negative regulation of inflammatory response
GO:0050776 P regulation of immune response
GO:0050821 P protein stabilization
GO:0050927 P positive regulation of positive chemotaxis
GO:0051098 P regulation of binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051894 P positive regulation of focal adhesion assembly
GO:0060039 P pericardium development
GO:0060290 P transdifferentiation
GO:0060395 P SMAD protein signal transduction
GO:0061045 P negative regulation of wound healing
GO:0070306 P lens fiber cell differentiation
GO:0070410 F co-SMAD binding
GO:0070412 F R-SMAD binding
GO:0071141 C SMAD protein complex
GO:0071144 C heteromeric SMAD protein complex
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0097191 P extrinsic apoptotic signaling pathway
GO:0097296 P activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
GO:1901203 P positive regulation of extracellular matrix assembly
162 O_BomoMSG10146_internal:A_BomoMSG_c22494_g1_i1
269bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
163 O_BomoMSG10147_5prime_partial:A_BomoMSG_c22494_g1_i1
196bp
164 O_BomoMSG10148_complete:A_BomoMSG_c22494_g1_i1
161bp
165 O_BomoMSG10149_internal:A_BomoMSG_c22494_g1_i2
332bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
166 O_BomoMSG1014_complete:A_BomoMSG_c4711_g1_i1
178bp
 heat_shock_protein_hsp_19.9_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
167 O_BomoMSG10150_5prime_partial:A_BomoMSG_c22494_g1_i2
196bp
168 O_BomoMSG10151_complete:A_BomoMSG_c22494_g1_i2
161bp
169 O_BomoMSG10152_3prime_partial:A_BomoMSG_c22494_g1_i3
286bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
170 O_BomoMSG10153_5prime_partial:A_BomoMSG_c22494_g1_i3
196bp
171 O_BomoMSG10154_complete:A_BomoMSG_c22494_g1_i3
161bp
172 O_BomoMSG10155_5prime_partial:A_BomoMSG_c22495_g1_i1
710bp
 putative_adaptor_protein_enigma_[Operophtera_brumata]
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
173 O_BomoMSG10156_complete:A_BomoMSG_c22495_g1_i1
101bp
174 O_BomoMSG10157_5prime_partial:A_BomoMSG_c22495_g1_i2
104bp
 putative_adaptor_protein_enigma_[Operophtera_brumata]
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
175 O_BomoMSG10158_complete:A_BomoMSG_c22495_g1_i2
101bp
176 O_BomoMSG10159_internal:A_BomoMSG_c22497_g1_i1
139bp
 PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
177 O_BomoMSG1015_complete:A_BomoMSG_c4711_g1_i1
100bp
178 O_BomoMSG10160_complete:A_BomoMSG_c22499_g1_i1
439bp
 RNA-binding_protein_cabeza_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0008344 P adult locomotory behavior
GO:0008345 P larval locomotory behavior
GO:0035327 C euchromatin
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0071013 C catalytic step 2 spliceosome
179 O_BomoMSG10161_complete:A_BomoMSG_c22499_g1_i1
180bp
 RNA-binding_protein_cabeza_isoform_X1_[Bombyx_mori]
180 O_BomoMSG10162_complete:A_BomoMSG_c22499_g1_i1
156bp
 RNA-binding_protein_cabeza_isoform_X2_[Bombyx_mori]
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