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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1381 O_BomoMSG11243_complete:A_BomoMSG_c23183_g1_i4
674bp
 myosin_light_chain_kinase,_smooth_muscle_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032154 C cleavage furrow
GO:0042995 C cell projection
GO:0046872 F metal ion binding
1382 O_BomoMSG11244_complete:A_BomoMSG_c23183_g1_i4
124bp
1383 O_BomoMSG11245_complete:A_BomoMSG_c23183_g1_i4
118bp
1384 O_BomoMSG11246_internal:A_BomoMSG_c23184_g1_i1
135bp
1385 O_BomoMSG11247_internal:A_BomoMSG_c23184_g1_i1
135bp
 uncharacterized_protein_LOC101745112_[Bombyx_mori]
1386 O_BomoMSG11248_internal:A_BomoMSG_c23184_g1_i1
135bp
1387 O_BomoMSG11249_3prime_partial:A_BomoMSG_c23186_g1_i1
189bp
 asparagine_synthetase_domain-containing_protein_CG17486_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
1388 O_BomoMSG1124_complete:A_BomoMSG_c5304_g1_i1
154bp
 repressor_splicing_factor_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
1389 O_BomoMSG11250_internal:A_BomoMSG_c23186_g1_i2
105bp
 asparagine_synthetase_domain-containing_protein_CG17486_isoform_X1_[Bombyx_mori]
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
1390 O_BomoMSG11251_5prime_partial:A_BomoMSG_c23187_g1_i1
300bp
 nucleolar_protein_9_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0044822 F RNA binding
1391 O_BomoMSG11252_3prime_partial:A_BomoMSG_c23187_g1_i1
163bp
1392 O_BomoMSG11253_3prime_partial:A_BomoMSG_c23188_g1_i1
248bp
 glucose_dehydrogenase_[FAD,_quinone]_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
1393 O_BomoMSG11254_complete:A_BomoMSG_c23190_g1_i1
445bp
 glutamate-rich_WD_repeat-containing_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
1394 O_BomoMSG11255_5prime_partial:A_BomoMSG_c23191_g1_i1
312bp
 uncharacterized_protein_LOC101735496_[Bombyx_mori]
1395 O_BomoMSG11256_complete:A_BomoMSG_c23191_g1_i1
118bp
1396 O_BomoMSG11257_5prime_partial:A_BomoMSG_c23191_g1_i2
493bp
 uncharacterized_protein_LOC101735496_[Bombyx_mori]
1397 O_BomoMSG11258_complete:A_BomoMSG_c23191_g1_i2
118bp
1398 O_BomoMSG11259_internal:A_BomoMSG_c23192_g1_i1
179bp
 ribosomal_protein_S8_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1399 O_BomoMSG1125_complete:A_BomoMSG_c5311_g1_i1
196bp
 protein_THEM6_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
1400 O_BomoMSG11260_internal:A_BomoMSG_c23193_g1_i1
126bp
 UPF0668_protein_C10orf76_homolog_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1401 O_BomoMSG11261_3prime_partial:A_BomoMSG_c23193_g1_i2
154bp
 UPF0668_protein_C10orf76_homolog_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1402 O_BomoMSG11262_internal:A_BomoMSG_c23193_g2_i2
111bp
 UPF0668_protein_C10orf76_homolog_[Bombyx_mori]
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1403 O_BomoMSG11263_complete:A_BomoMSG_c23194_g1_i1
295bp
 tafazzin_homolog_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0006644 P phospholipid metabolic process
GO:0007006 P mitochondrial membrane organization
GO:0007007 P inner mitochondrial membrane organization
GO:0007291 P sperm individualization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016746 F acyltransferase activity
GO:0031224 C intrinsic component of membrane
GO:0031966 C mitochondrial membrane
GO:0032048 P cardiolipin metabolic process
GO:0032049 P cardiolipin biosynthetic process
GO:0032577 F phosphatidylcholine:cardiolipin O-linoleoyltransferase activity
GO:0035965 P cardiolipin acyl-chain remodeling
1404 O_BomoMSG11264_complete:A_BomoMSG_c23194_g1_i1
128bp
1405 O_BomoMSG11265_complete:A_BomoMSG_c23197_g1_i1
275bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_alpha-like_[Bombyx_mori]
GO:0001819 P positive regulation of cytokine production
GO:0001961 P positive regulation of cytokine-mediated signaling pathway
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0031325 P positive regulation of cellular metabolic process
1406 O_BomoMSG11266_internal:A_BomoMSG_c23199_g1_i1
208bp
1407 O_BomoMSG11267_3prime_partial:A_BomoMSG_c23199_g1_i1
199bp
 tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
1408 O_BomoMSG11268_5prime_partial:A_BomoMSG_c23199_g1_i1
118bp
 hypothetical_protein_RR48_14054_[Papilio_machaon]
1409 O_BomoMSG11269_internal:A_BomoMSG_c23199_g1_i2
458bp
 tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
1410 O_BomoMSG1126_complete:A_BomoMSG_c5313_g1_i1
182bp
 succinate_dehydrogenase_cytochrome_b560_subunit,_mitochondrial_[Bombyx_mori]
GO:0000104 F succinate dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005749 C mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
GO:0006099 P tricarboxylic acid cycle
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0020037 F heme binding
GO:0045281 C succinate dehydrogenase complex
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
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