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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1351 O_BomoMSG11216_internal:A_BomoMSG_c23171_g1_i2
259bp
 coronin-6_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization
GO:0051015 F actin filament binding
1352 O_BomoMSG11217_3prime_partial:A_BomoMSG_c23172_g1_i1
206bp
 DNA-directed_RNA_polymerase_III_subunit_RPC8_[Helicoverpa_armigera]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0032481 P positive regulation of type I interferon production
GO:0043231 C intracellular membrane-bounded organelle
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
1353 O_BomoMSG11218_complete:A_BomoMSG_c23174_g1_i1
177bp
 39S_ribosomal_protein_L35,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007293 P germarium-derived egg chamber formation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0060429 P epithelium development
1354 O_BomoMSG11219_internal:A_BomoMSG_c23175_g1_i1
458bp
 sarcolemmal_membrane-associated_protein_isoform_X1_[Bombyx_mori]
1355 O_BomoMSG1121_internal:A_BomoMSG_c5276_g1_i1
106bp
1356 O_BomoMSG11220_5prime_partial:A_BomoMSG_c23175_g1_i1
145bp
1357 O_BomoMSG11221_5prime_partial:A_BomoMSG_c23175_g1_i1
120bp
1358 O_BomoMSG11222_5prime_partial:A_BomoMSG_c23175_g1_i1
117bp
1359 O_BomoMSG11223_complete:A_BomoMSG_c23176_g1_i1
219bp
 nucleoside_diphosphate-linked_moiety_X_motif_8_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1360 O_BomoMSG11224_5prime_partial:A_BomoMSG_c23177_g1_i1
220bp
 39S_ribosomal_protein_L39,_mitochondrial-like_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0004827 F proline-tRNA ligase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
1361 O_BomoMSG11225_5prime_partial:A_BomoMSG_c23177_g1_i1
189bp
1362 O_BomoMSG11226_complete:A_BomoMSG_c23177_g1_i2
344bp
 39S_ribosomal_protein_L39,_mitochondrial-like_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0004827 F proline-tRNA ligase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
1363 O_BomoMSG11227_5prime_partial:A_BomoMSG_c23177_g1_i2
189bp
1364 O_BomoMSG11228_internal:A_BomoMSG_c23178_g1_i1
113bp
1365 O_BomoMSG11229_5prime_partial:A_BomoMSG_c23178_g1_i1
108bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
1366 O_BomoMSG1122_internal:A_BomoMSG_c5287_g1_i1
164bp
 serine_protease_inhibitor_11_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
1367 O_BomoMSG11230_internal:A_BomoMSG_c23178_g1_i2
135bp
1368 O_BomoMSG11231_5prime_partial:A_BomoMSG_c23178_g1_i2
130bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
1369 O_BomoMSG11232_5prime_partial:A_BomoMSG_c23179_g1_i2
129bp
 uncharacterized_protein_LOC101741558_[Bombyx_mori]
1370 O_BomoMSG11233_5prime_partial:A_BomoMSG_c23181_g1_i2
133bp
 zinc_finger_and_SCAN_domain-containing_protein_12-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1371 O_BomoMSG11234_complete:A_BomoMSG_c23181_g1_i3
356bp
 zinc_finger_and_SCAN_domain-containing_protein_12-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1372 O_BomoMSG11235_complete:A_BomoMSG_c23183_g1_i1
655bp
 myosin_light_chain_kinase,_smooth_muscle_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032154 C cleavage furrow
GO:0042995 C cell projection
GO:0046872 F metal ion binding
1373 O_BomoMSG11236_complete:A_BomoMSG_c23183_g1_i1
124bp
1374 O_BomoMSG11237_complete:A_BomoMSG_c23183_g1_i1
118bp
1375 O_BomoMSG11238_5prime_partial:A_BomoMSG_c23183_g1_i2
562bp
 myosin_light_chain_kinase,_smooth_muscle_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0032154 C cleavage furrow
GO:0042995 C cell projection
GO:0046872 F metal ion binding
1376 O_BomoMSG11239_complete:A_BomoMSG_c23183_g1_i2
124bp
1377 O_BomoMSG1123_5prime_partial:A_BomoMSG_c5287_g1_i1
123bp
1378 O_BomoMSG11240_complete:A_BomoMSG_c23183_g1_i2
118bp
1379 O_BomoMSG11241_complete:A_BomoMSG_c23183_g1_i3
346bp
 myosin_light_chain_kinase,_smooth_muscle_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032154 C cleavage furrow
GO:0042995 C cell projection
GO:0046872 F metal ion binding
1380 O_BomoMSG11242_complete:A_BomoMSG_c23183_g1_i3
110bp
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