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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1321 O_BomoMSG1118_internal:A_BomoMSG_c5264_g1_i1
108bp
 uncharacterized_protein_LOC110383126_[Helicoverpa_armigera]
GO:0003993 F acid phosphatase activity
GO:0008707 F 4-phytase activity
GO:0008877 F glucose-1-phosphatase activity
GO:0016036 P cellular response to phosphate starvation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0042597 C periplasmic space
GO:0071454 P cellular response to anoxia
1322 O_BomoMSG11190_5prime_partial:A_BomoMSG_c23159_g1_i1
268bp
 tryptophan--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001570 P vasculogenesis
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004830 F tryptophan-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006436 P tryptophanyl-tRNA aminoacylation
GO:0016874 F ligase activity
1323 O_BomoMSG11191_5prime_partial:A_BomoMSG_c23159_g1_i2
243bp
 tryptophan--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001570 P vasculogenesis
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004830 F tryptophan-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006436 P tryptophanyl-tRNA aminoacylation
GO:0016874 F ligase activity
1324 O_BomoMSG11192_5prime_partial:A_BomoMSG_c23159_g1_i3
369bp
 tryptophan--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001570 P vasculogenesis
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004830 F tryptophan-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006436 P tryptophanyl-tRNA aminoacylation
GO:0016874 F ligase activity
1325 O_BomoMSG11193_internal:A_BomoMSG_c23161_g1_i1
579bp
 uncharacterized_protein_LOC101742002_isoform_X1_[Bombyx_mori]
1326 O_BomoMSG11194_internal:A_BomoMSG_c23161_g1_i2
224bp
 uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
1327 O_BomoMSG11195_internal:A_BomoMSG_c23161_g1_i3
250bp
 uncharacterized_protein_LOC101742002_isoform_X2_[Bombyx_mori]
1328 O_BomoMSG11196_5prime_partial:A_BomoMSG_c23162_g1_i2
353bp
 WD_repeat-containing_protein_26_[Bombyx_mori]
GO:0005737 C cytoplasm
1329 O_BomoMSG11197_complete:A_BomoMSG_c23162_g1_i2
169bp
1330 O_BomoMSG11198_complete:A_BomoMSG_c23162_g1_i2
164bp
1331 O_BomoMSG11199_complete:A_BomoMSG_c23162_g1_i2
153bp
1332 O_BomoMSG1119_internal:A_BomoMSG_c5271_g1_i1
142bp
 ankyrin_repeat_and_LEM_domain-containing_protein_1_[Bombyx_mori]
1333 O_BomoMSG111_5prime_partial:A_BomoMSG_c407_g1_i1
190bp
 sid-1-related_gene1_precursor_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003725 F double-stranded RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033227 P dsRNA transport
GO:0051033 F RNA transmembrane transporter activity
1334 O_BomoMSG11200_3prime_partial:A_BomoMSG_c23163_g1_i2
241bp
 nicotinamide/nicotinic_acid_mononucleotide_adenylyltransferase_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000309 F nicotinamide-nucleotide adenylyltransferase activity
GO:0003824 F catalytic activity
GO:0004515 F nicotinate-nucleotide adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0009058 P biosynthetic process
GO:0009435 P NAD biosynthetic process
GO:0009611 P response to wounding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019363 P pyridine nucleotide biosynthetic process
GO:0034628 P 'de novo' NAD biosynthetic process from aspartate
1335 O_BomoMSG11201_internal:A_BomoMSG_c23163_g1_i3
105bp
 nicotinamide/nicotinic_acid_mononucleotide_adenylyltransferase_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000309 F nicotinamide-nucleotide adenylyltransferase activity
GO:0003824 F catalytic activity
GO:0004515 F nicotinate-nucleotide adenylyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0009058 P biosynthetic process
GO:0009435 P NAD biosynthetic process
GO:0009611 P response to wounding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019363 P pyridine nucleotide biosynthetic process
GO:0019674 P NAD metabolic process
GO:0034628 P 'de novo' NAD biosynthetic process from aspartate
1336 O_BomoMSG11202_3prime_partial:A_BomoMSG_c23165_g1_i1
245bp
 cationic_amino_acid_transporter_3_[Bombyx_mori]
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0002537 P nitric oxide production involved in inflammatory response
GO:0003333 P amino acid transmembrane transport
GO:0005289 F high-affinity L-arginine transmembrane transporter activity
GO:0005292 F high-affinity lysine transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006520 P cellular amino acid metabolic process
GO:0006809 P nitric oxide biosynthetic process
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015174 F basic amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015181 F L-arginine transmembrane transporter activity
GO:0015189 F L-lysine transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015809 P L-arginine transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042116 P macrophage activation
GO:0043030 P regulation of macrophage activation
GO:0050727 P regulation of inflammatory response
GO:0061459 F L-arginine transmembrane transporter activity
GO:0097626 F low-affinity L-arginine transmembrane transporter activity
GO:0097627 F high-affinity L-ornithine transmembrane transporter activity
GO:0097638 P L-arginine import across plasma membrane
GO:0097639 P L-lysine import across plasma membrane
GO:0097640 P L-ornithine import across plasma membrane
GO:1902023 P L-arginine transmembrane transport
GO:1903352 P L-ornithine transmembrane transport
GO:1990822 P basic amino acid transmembrane transport
1337 O_BomoMSG11203_internal:A_BomoMSG_c23166_g1_i1
213bp
1338 O_BomoMSG11204_internal:A_BomoMSG_c23166_g1_i1
213bp
 vinculin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
1339 O_BomoMSG11205_complete:A_BomoMSG_c23166_g1_i1
111bp
1340 O_BomoMSG11206_5prime_partial:A_BomoMSG_c23167_g1_i2
109bp
1341 O_BomoMSG11207_internal:A_BomoMSG_c23168_g1_i1
121bp
 toll-like_receptor_6_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
1342 O_BomoMSG11208_5prime_partial:A_BomoMSG_c23168_g1_i1
114bp
1343 O_BomoMSG11209_internal:A_BomoMSG_c23168_g1_i3
362bp
 protein_toll_isoform_X2_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
1344 O_BomoMSG1120_internal:A_BomoMSG_c5276_g1_i1
107bp
 uncharacterized_protein_LOC105841590_[Bombyx_mori]
1345 O_BomoMSG11210_complete:A_BomoMSG_c23168_g1_i3
110bp
1346 O_BomoMSG11211_complete:A_BomoMSG_c23169_g1_i1
634bp
 large_subunit_GTPase_1_homolog_[Bombyx_mori]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0009267 P cellular response to starvation
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016787 F hydrolase activity
GO:0040008 P regulation of growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0051168 P nuclear export
1347 O_BomoMSG11212_complete:A_BomoMSG_c23169_g1_i1
216bp
1348 O_BomoMSG11213_complete:A_BomoMSG_c23169_g1_i1
117bp
1349 O_BomoMSG11214_5prime_partial:A_BomoMSG_c23170_g1_i1
286bp
 ubiquitin_conjugation_factor_E4_B_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0003222 P ventricular trabecula myocardium morphogenesis
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006513 P protein monoubiquitination
GO:0008626 P granzyme-mediated apoptotic signaling pathway
GO:0009411 P response to UV
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0031175 P neuron projection development
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0034976 P response to endoplasmic reticulum stress
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044257 P cellular protein catabolic process
GO:0051082 F unfolded protein binding
GO:0051117 F ATPase binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
1350 O_BomoMSG11215_internal:A_BomoMSG_c23171_g1_i1
266bp
 coronin-6_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization
GO:0051015 F actin filament binding
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