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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13261 O_BomoMSG21936_complete:A_BomoMSG_c27017_g1_i2
380bp
 septin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005875 C microtubule associated complex
GO:0005940 C septin ring
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
13262 O_BomoMSG21937_complete:A_BomoMSG_c27017_g1_i2
110bp
13263 O_BomoMSG21938_complete:A_BomoMSG_c27018_g1_i1
403bp
 USP6_N-terminal-like_protein_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1903358 P regulation of Golgi organization
13264 O_BomoMSG21939_complete:A_BomoMSG_c27018_g1_i2
450bp
 USP6_N-terminal-like_protein_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1903358 P regulation of Golgi organization
13265 O_BomoMSG2193_internal:A_BomoMSG_c10312_g1_i1
101bp
 apolipophorins_isoform_X2_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
13266 O_BomoMSG21940_complete:A_BomoMSG_c27018_g1_i3
450bp
 USP6_N-terminal-like_protein_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1903358 P regulation of Golgi organization
13267 O_BomoMSG21941_5prime_partial:A_BomoMSG_c27020_g1_i1
101bp
 endophilin-A_isoform_X3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0042171 F lysophosphatidic acid acyltransferase activity
GO:0048488 P synaptic vesicle endocytosis
GO:0050803 P regulation of synapse structure or activity
13268 O_BomoMSG21942_complete:A_BomoMSG_c27020_g1_i7
178bp
 trafficking_protein_particle_complex_subunit_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030008 C TRAPP complex
13269 O_BomoMSG21943_complete:A_BomoMSG_c27020_g3_i1
104bp
 MAPK_regulated_corepressor_interacting_protein_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
13270 O_BomoMSG21944_complete:A_BomoMSG_c27020_g3_i2
150bp
 MAPK_regulated_corepressor_interacting_protein_2_[Bombyx_mori]
13271 O_BomoMSG21945_5prime_partial:A_BomoMSG_c27021_g1_i1
472bp
 uncharacterized_protein_LOC101737556_[Bombyx_mori]
13272 O_BomoMSG21946_5prime_partial:A_BomoMSG_c27021_g1_i2
168bp
 uncharacterized_protein_LOC101737556_[Bombyx_mori]
13273 O_BomoMSG21947_5prime_partial:A_BomoMSG_c27021_g1_i3
383bp
 uncharacterized_protein_LOC101737556_[Bombyx_mori]
13274 O_BomoMSG21948_complete:A_BomoMSG_c27021_g1_i4
507bp
 uncharacterized_protein_LOC101737556_[Bombyx_mori]
13275 O_BomoMSG21949_5prime_partial:A_BomoMSG_c27022_g1_i1
439bp
 probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
13276 O_BomoMSG2194_internal:A_BomoMSG_c10318_g1_i1
115bp
 catenin_delta-2_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005912 C adherens junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0014069 C postsynaptic density
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043204 C perikaryon
13277 O_BomoMSG21950_internal:A_BomoMSG_c27022_g2_i1
141bp
 probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
13278 O_BomoMSG21951_internal:A_BomoMSG_c27022_g2_i1
141bp
13279 O_BomoMSG21952_complete:A_BomoMSG_c27023_g1_i2
604bp
 mRNA-capping_enzyme_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004484 F mRNA guanylyltransferase activity
GO:0004651 F polynucleotide 5'-phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008152 P metabolic process
GO:0008192 F RNA guanylyltransferase activity
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050355 F triphosphatase activity
GO:0098507 P polynucleotide 5' dephosphorylation
13280 O_BomoMSG21953_internal:A_BomoMSG_c27024_g1_i1
293bp
 zinc_finger_CCCH_domain-containing_protein_18_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
13281 O_BomoMSG21954_5prime_partial:A_BomoMSG_c27024_g1_i1
181bp
13282 O_BomoMSG21955_5prime_partial:A_BomoMSG_c27024_g1_i1
145bp
13283 O_BomoMSG21956_3prime_partial:A_BomoMSG_c27024_g1_i1
99bp
13284 O_BomoMSG21957_internal:A_BomoMSG_c27024_g1_i2
194bp
 zinc_finger_CCCH_domain-containing_protein_18_isoform_X3_[Bombyx_mori]
13285 O_BomoMSG21958_internal:A_BomoMSG_c27024_g1_i3
186bp
13286 O_BomoMSG21959_internal:A_BomoMSG_c27024_g1_i3
185bp
 zinc_finger_CCCH_domain-containing_protein_18_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
13287 O_BomoMSG2195_5prime_partial:A_BomoMSG_c10321_g1_i1
102bp
13288 O_BomoMSG21960_3prime_partial:A_BomoMSG_c27024_g1_i4
641bp
 zinc_finger_CCCH_domain-containing_protein_18_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
13289 O_BomoMSG21961_complete:A_BomoMSG_c27024_g1_i4
201bp
13290 O_BomoMSG21962_5prime_partial:A_BomoMSG_c27024_g1_i4
181bp
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