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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13291 O_BomoMSG21963_complete:A_BomoMSG_c27024_g1_i4
118bp
13292 O_BomoMSG21964_internal:A_BomoMSG_c27025_g1_i1
746bp
 uncharacterized_protein_LOC110381036,_partial_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
13293 O_BomoMSG21965_5prime_partial:A_BomoMSG_c27025_g1_i1
178bp
13294 O_BomoMSG21966_5prime_partial:A_BomoMSG_c27025_g1_i1
158bp
13295 O_BomoMSG21967_internal:A_BomoMSG_c27025_g2_i1
150bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
13296 O_BomoMSG21968_internal:A_BomoMSG_c27025_g1_i2
224bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
13297 O_BomoMSG21969_5prime_partial:A_BomoMSG_c27025_g1_i2
178bp
13298 O_BomoMSG2196_complete:A_BomoMSG_c10324_g1_i1
331bp
 3-ketodihydrosphingosine_reductase_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006666 P 3-keto-sphinganine metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0047560 F 3-dehydrosphinganine reductase activity
GO:0055114 P obsolete oxidation-reduction process
13299 O_BomoMSG21970_5prime_partial:A_BomoMSG_c27025_g1_i2
158bp
13300 O_BomoMSG21971_internal:A_BomoMSG_c27025_g1_i3
480bp
 PREDICTED:_microtubule-actin_cross-linking_factor_1_isoform_X22_[Polistes_canadensis]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
13301 O_BomoMSG21972_5prime_partial:A_BomoMSG_c27025_g1_i3
178bp
13302 O_BomoMSG21973_5prime_partial:A_BomoMSG_c27025_g1_i3
158bp
13303 O_BomoMSG21974_3prime_partial:A_BomoMSG_c27026_g1_i1
444bp
 F-box-like/WD_repeat-containing_protein_TBL1XR1_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0002021 P response to dietary excess
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005876 C spindle microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008013 F beta-catenin binding
GO:0010468 P regulation of gene expression
GO:0016042 P lipid catabolic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0017053 C transcription repressor complex
GO:0030814 P obsolete regulation of cAMP metabolic process
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0047485 F protein N-terminus binding
GO:0050872 P white fat cell differentiation
GO:0060070 P canonical Wnt signaling pathway
GO:0060612 P adipose tissue development
GO:0060613 P fat pad development
GO:0090207 P regulation of triglyceride metabolic process
13304 O_BomoMSG21975_3prime_partial:A_BomoMSG_c27027_g1_i1
105bp
 dual_specificity_protein_kinase_CLK2_isoform_X5_[Bombyx_mori]
13305 O_BomoMSG21976_3prime_partial:A_BomoMSG_c27027_g1_i2
134bp
 serine/threonine-protein_kinase_Doa_isoform_X8_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
13306 O_BomoMSG21977_complete:A_BomoMSG_c27027_g1_i5
314bp
 probable_serine/threonine-protein_kinase_dyrk2_isoform_X1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
13307 O_BomoMSG21978_complete:A_BomoMSG_c27027_g1_i5
114bp
 Lyase_[Operophtera_brumata]
13308 O_BomoMSG21979_complete:A_BomoMSG_c27027_g1_i5
111bp
13309 O_BomoMSG2197_3prime_partial:A_BomoMSG_c10328_g1_i1
400bp
 notchless_protein_homolog_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007219 P Notch signaling pathway
13310 O_BomoMSG21980_complete:A_BomoMSG_c27027_g1_i5
108bp
 dual_specificity_protein_kinase_CLK2_isoform_X6_[Helicoverpa_armigera]
13311 O_BomoMSG21981_complete:A_BomoMSG_c27027_g1_i5
101bp
13312 O_BomoMSG21982_internal:A_BomoMSG_c27027_g1_i6
394bp
 dual_specificity_protein_kinase_CLK2_isoform_X4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
13313 O_BomoMSG21983_complete:A_BomoMSG_c27027_g1_i6
101bp
13314 O_BomoMSG21984_5prime_partial:A_BomoMSG_c27028_g2_i1
106bp
13315 O_BomoMSG21985_complete:A_BomoMSG_c27030_g1_i1
466bp
 TRAS3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
13316 O_BomoMSG21986_complete:A_BomoMSG_c27030_g1_i2
466bp
 TRAS3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
13317 O_BomoMSG21987_5prime_partial:A_BomoMSG_c27030_g1_i3
286bp
 TRAS3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
13318 O_BomoMSG21988_complete:A_BomoMSG_c27031_g1_i1
673bp
 uncharacterized_protein_LOC101738615_isoform_X2_[Bombyx_mori]
13319 O_BomoMSG21989_complete:A_BomoMSG_c27031_g1_i1
169bp
13320 O_BomoMSG2198_internal:A_BomoMSG_c10336_g1_i1
317bp
 non-canonical_poly(A)_RNA_polymerase_protein_Trf4-1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0071044 P histone mRNA catabolic process
GO:0071897 P DNA biosynthetic process
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