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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13231 O_BomoMSG21909_complete:A_BomoMSG_c27009_g2_i1
196bp
 PREDICTED:_uncharacterized_protein_LOC106716097_[Papilio_machaon]
13232 O_BomoMSG2190_5prime_partial:A_BomoMSG_c10307_g1_i1
181bp
 phospholipase_A1_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0004806 F triglyceride lipase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006629 P lipid metabolic process
GO:0009395 P phospholipid catabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019376 P galactolipid catabolic process
GO:0046872 F metal ion binding
GO:0047372 F acylglycerol lipase activity
GO:0047714 F galactolipase activity
GO:0052689 F carboxylic ester hydrolase activity
13233 O_BomoMSG21910_complete:A_BomoMSG_c27009_g2_i2
237bp
 sperm-associated_antigen_7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008150 P biological_process
13234 O_BomoMSG21911_complete:A_BomoMSG_c27009_g2_i3
237bp
 sperm-associated_antigen_7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008150 P biological_process
13235 O_BomoMSG21912_5prime_partial:A_BomoMSG_c27010_g1_i1
347bp
 perilipin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0006642 P triglyceride mobilization
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0010883 P regulation of lipid storage
GO:0010898 P positive regulation of triglyceride catabolic process
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0032994 C protein-lipid complex
GO:0034389 P lipid droplet organization
GO:1990044 P protein localization to lipid droplet
13236 O_BomoMSG21913_5prime_partial:A_BomoMSG_c27010_g1_i2
400bp
 perilipin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0006642 P triglyceride mobilization
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0010883 P regulation of lipid storage
GO:0010898 P positive regulation of triglyceride catabolic process
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0032994 C protein-lipid complex
GO:0034389 P lipid droplet organization
GO:1990044 P protein localization to lipid droplet
13237 O_BomoMSG21914_5prime_partial:A_BomoMSG_c27010_g1_i3
396bp
 perilipin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0006642 P triglyceride mobilization
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0010883 P regulation of lipid storage
GO:0010898 P positive regulation of triglyceride catabolic process
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0032994 C protein-lipid complex
GO:0034389 P lipid droplet organization
GO:1990044 P protein localization to lipid droplet
13238 O_BomoMSG21915_5prime_partial:A_BomoMSG_c27011_g1_i1
563bp
 uncharacterized_protein_LOC101736400_[Bombyx_mori]
13239 O_BomoMSG21916_3prime_partial:A_BomoMSG_c27011_g1_i1
127bp
13240 O_BomoMSG21917_5prime_partial:A_BomoMSG_c27011_g1_i1
118bp
13241 O_BomoMSG21918_5prime_partial:A_BomoMSG_c27011_g1_i2
422bp
 uncharacterized_protein_LOC101736400_[Bombyx_mori]
13242 O_BomoMSG21919_complete:A_BomoMSG_c27011_g1_i3
713bp
 uncharacterized_protein_LOC101736400_[Bombyx_mori]
13243 O_BomoMSG2191_3prime_partial:A_BomoMSG_c10308_g1_i1
101bp
 gastrula_zinc_finger_protein_XlCGF57.1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006311 P meiotic gene conversion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0010845 P positive regulation of reciprocal meiotic recombination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
13244 O_BomoMSG21920_complete:A_BomoMSG_c27011_g1_i3
200bp
13245 O_BomoMSG21921_complete:A_BomoMSG_c27011_g1_i3
128bp
13246 O_BomoMSG21922_complete:A_BomoMSG_c27012_g1_i1
140bp
 probable_peptide_chain_release_factor_C12orf65_homolog,_mitochondrial_[Bombyx_mori]
GO:0003747 F translation release factor activity
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006412 P translation
GO:0006415 P translational termination
GO:0016149 F translation release factor activity, codon specific
GO:0016150 F translation release factor activity, codon nonspecific
GO:0043022 F ribosome binding
GO:0070126 P mitochondrial translational termination
GO:0072344 P rescue of stalled ribosome
13247 O_BomoMSG21923_5prime_partial:A_BomoMSG_c27013_g1_i1
487bp
 uncharacterized_protein_LOC101744060_[Bombyx_mori]
13248 O_BomoMSG21924_3prime_partial:A_BomoMSG_c27013_g1_i4
125bp
 uncharacterized_protein_LOC101744060_[Bombyx_mori]
13249 O_BomoMSG21925_complete:A_BomoMSG_c27013_g1_i5
935bp
 uncharacterized_protein_LOC101744060_[Bombyx_mori]
13250 O_BomoMSG21926_3prime_partial:A_BomoMSG_c27013_g7_i1
115bp
13251 O_BomoMSG21927_complete:A_BomoMSG_c27014_g1_i1
292bp
 N-alpha-acetyltransferase_30_[Bombyx_mori]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031417 C NatC complex
13252 O_BomoMSG21928_5prime_partial:A_BomoMSG_c27014_g1_i2
274bp
 N-alpha-acetyltransferase_30_[Bombyx_mori]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031417 C NatC complex
13253 O_BomoMSG21929_5prime_partial:A_BomoMSG_c27015_g1_i1
510bp
 protein_SMG5_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
13254 O_BomoMSG2192_complete:A_BomoMSG_c10311_g1_i1
594bp
 nucleolin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
13255 O_BomoMSG21930_5prime_partial:A_BomoMSG_c27015_g1_i2
206bp
 protein_SMG5_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
13256 O_BomoMSG21931_internal:A_BomoMSG_c27015_g2_i1
134bp
 protein_SMG5_[Bombyx_mori]
13257 O_BomoMSG21932_3prime_partial:A_BomoMSG_c27016_g1_i1
282bp
 protein_artemis-like_isoform_X1_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008409 F 5'-3' exonuclease activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0030183 P B cell differentiation
GO:0031848 P protection from non-homologous end joining at telomere
GO:0033151 P V(D)J recombination
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0051276 P chromosome organization
GO:0070419 C nonhomologous end joining complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
13258 O_BomoMSG21933_3prime_partial:A_BomoMSG_c27016_g1_i2
282bp
 protein_artemis-like_isoform_X1_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008409 F 5'-3' exonuclease activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0030183 P B cell differentiation
GO:0031848 P protection from non-homologous end joining at telomere
GO:0033151 P V(D)J recombination
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0051276 P chromosome organization
GO:0070419 C nonhomologous end joining complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
13259 O_BomoMSG21934_5prime_partial:A_BomoMSG_c27017_g1_i1
180bp
 septin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005875 C microtubule associated complex
GO:0005940 C septin ring
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
13260 O_BomoMSG21935_complete:A_BomoMSG_c27017_g1_i1
110bp
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