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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13201 O_BomoMSG21882_5prime_partial:A_BomoMSG_c27001_g1_i6
294bp
 long-chain_fatty_acid_transport_protein_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0009409 P response to cold
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031652 P positive regulation of heat generation
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0032049 P cardiolipin biosynthetic process
GO:0032868 P response to insulin
GO:0033211 P adiponectin-activated signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0071072 P negative regulation of phospholipid biosynthetic process
GO:0071902 P positive regulation of protein serine/threonine kinase activity
13202 O_BomoMSG21883_5prime_partial:A_BomoMSG_c27001_g2_i4
329bp
 fatty_acid_transport_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0009409 P response to cold
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0031652 P positive regulation of heat generation
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0032049 P cardiolipin biosynthetic process
GO:0032868 P response to insulin
GO:0033211 P adiponectin-activated signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0071072 P negative regulation of phospholipid biosynthetic process
GO:0071902 P positive regulation of protein serine/threonine kinase activity
13203 O_BomoMSG21884_5prime_partial:A_BomoMSG_c27003_g1_i2
233bp
 GTP-binding_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006414 P translational elongation
GO:0008150 P biological_process
GO:0043231 C intracellular membrane-bounded organelle
13204 O_BomoMSG21885_5prime_partial:A_BomoMSG_c27003_g1_i2
128bp
 GTP-binding_protein_2_[Bombyx_mori]
13205 O_BomoMSG21886_complete:A_BomoMSG_c27003_g1_i5
823bp
 GTP-binding_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006414 P translational elongation
GO:0008152 P metabolic process
GO:0043231 C intracellular membrane-bounded organelle
13206 O_BomoMSG21887_complete:A_BomoMSG_c27003_g1_i5
271bp
13207 O_BomoMSG21888_complete:A_BomoMSG_c27003_g1_i5
185bp
 GTP-binding_protein_2_[Bombyx_mori]
13208 O_BomoMSG21889_complete:A_BomoMSG_c27003_g1_i5
156bp
13209 O_BomoMSG2188_complete:A_BomoMSG_c10290_g1_i2
244bp
13210 O_BomoMSG21890_complete:A_BomoMSG_c27004_g1_i1
364bp
 2',5'-phosphodiesterase_12_isoform_X2_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
13211 O_BomoMSG21891_3prime_partial:A_BomoMSG_c27004_g1_i1
123bp
 2',5'-phosphodiesterase_12_isoform_X1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
13212 O_BomoMSG21892_internal:A_BomoMSG_c27004_g1_i2
118bp
 2',5'-phosphodiesterase_12_isoform_X1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
13213 O_BomoMSG21893_5prime_partial:A_BomoMSG_c27005_g1_i1
118bp
 MIT_domain-containing_protein_1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
13214 O_BomoMSG21894_complete:A_BomoMSG_c27005_g1_i2
243bp
 MIT_domain-containing_protein_1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000920 P septum digestion after cytokinesis
GO:0005768 C endosome
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0030496 C midbody
GO:0031902 C late endosome membrane
GO:0032091 P negative regulation of protein binding
GO:0035091 F phosphatidylinositol binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0051301 P cell division
GO:0070062 C extracellular exosome
13215 O_BomoMSG21895_complete:A_BomoMSG_c27005_g1_i2
109bp
13216 O_BomoMSG21896_5prime_partial:A_BomoMSG_c27006_g1_i1
266bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
13217 O_BomoMSG21897_complete:A_BomoMSG_c27006_g1_i2
260bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
13218 O_BomoMSG21898_complete:A_BomoMSG_c27006_g1_i3
337bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
13219 O_BomoMSG21899_5prime_partial:A_BomoMSG_c27006_g1_i4
284bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
13220 O_BomoMSG2189_complete:A_BomoMSG_c10304_g1_i1
283bp
 chloride_intracellular_channel_isoform_X1_[Bombyx_mori]
GO:0002064 P epithelial cell development
GO:0004364 F glutathione transferase activity
GO:0005244 F voltage-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005887 C integral component of plasma membrane
GO:0006749 P glutathione metabolic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0034707 C chloride channel complex
GO:0034765 P regulation of ion transmembrane transport
GO:0035150 P regulation of tube size
GO:0043296 C apical junction complex
GO:1902476 P chloride transmembrane transport
13221 O_BomoMSG218_internal:A_BomoMSG_c1023_g1_i1
146bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001669 C acrosomal vesicle
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0004222 F metalloendopeptidase activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005912 C adherens junction
GO:0006508 P proteolysis
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008584 P male gonad development
GO:0009986 C cell surface
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030308 P negative regulation of cell growth
GO:0030336 P negative regulation of cell migration
GO:0030574 P collagen catabolic process
GO:0031410 C cytoplasmic vesicle
GO:0042246 P tissue regeneration
GO:0042995 C cell projection
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0070062 C extracellular exosome
GO:0070528 P protein kinase C signaling
GO:1900121 P negative regulation of receptor binding
13222 O_BomoMSG21900_complete:A_BomoMSG_c27007_g1_i1
785bp
 paraplegin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0007155 P cell adhesion
GO:0007399 P nervous system development
GO:0008089 P anterograde axonal transport
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030155 P regulation of cell adhesion
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:1904115 C axon cytoplasm
13223 O_BomoMSG21901_complete:A_BomoMSG_c27007_g1_i1
116bp
13224 O_BomoMSG21902_complete:A_BomoMSG_c27007_g1_i1
112bp
 Uncharacterised_protein_[Flavonifractor_plautii]
13225 O_BomoMSG21903_5prime_partial:A_BomoMSG_c27008_g1_i1
294bp
 headcase_protein_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016246 P RNA interference
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030425 C dendrite
GO:0035071 P salivary gland cell autophagic cell death
GO:0035147 P branch fusion, open tracheal system
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0048471 C perinuclear region of cytoplasm
GO:0048675 P axon extension
GO:0050768 P negative regulation of neurogenesis
GO:1904799 P regulation of neuron remodeling
13226 O_BomoMSG21904_complete:A_BomoMSG_c27008_g1_i2
413bp
 headcase_protein_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016246 P RNA interference
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030425 C dendrite
GO:0035071 P salivary gland cell autophagic cell death
GO:0035147 P branch fusion, open tracheal system
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0048471 C perinuclear region of cytoplasm
GO:0048675 P axon extension
GO:0050768 P negative regulation of neurogenesis
GO:1904799 P regulation of neuron remodeling
13227 O_BomoMSG21905_3prime_partial:A_BomoMSG_c27008_g1_i2
129bp
13228 O_BomoMSG21906_complete:A_BomoMSG_c27008_g1_i2
113bp
13229 O_BomoMSG21907_5prime_partial:A_BomoMSG_c27008_g1_i3
123bp
 headcase_protein_[Bombyx_mori]
GO:0002165 P instar larval or pupal development
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016246 P RNA interference
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030425 C dendrite
GO:0035071 P salivary gland cell autophagic cell death
GO:0035147 P branch fusion, open tracheal system
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0048471 C perinuclear region of cytoplasm
GO:0048675 P axon extension
GO:0050768 P negative regulation of neurogenesis
GO:1904799 P regulation of neuron remodeling
13230 O_BomoMSG21908_complete:A_BomoMSG_c27009_g2_i1
237bp
 sperm-associated_antigen_7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008150 P biological_process
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