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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12961 O_BomoMSG21666_3prime_partial:A_BomoMSG_c26966_g1_i2
447bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
12962 O_BomoMSG21667_5prime_partial:A_BomoMSG_c26966_g1_i2
389bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
12963 O_BomoMSG21668_internal:A_BomoMSG_c26966_g1_i3
147bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0009791 P post-embryonic development
GO:0034378 P chylomicron assembly
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
12964 O_BomoMSG21669_internal:A_BomoMSG_c26966_g1_i4
233bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
12965 O_BomoMSG2166_internal:A_BomoMSG_c10250_g1_i2
108bp
 uncharacterized_protein_LOC101737479_[Bombyx_mori]
12966 O_BomoMSG21670_internal:A_BomoMSG_c26966_g1_i5
157bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
12967 O_BomoMSG21671_internal:A_BomoMSG_c26966_g1_i6
324bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
12968 O_BomoMSG21672_5prime_partial:A_BomoMSG_c26967_g3_i2
116bp
12969 O_BomoMSG21673_complete:A_BomoMSG_c26967_g3_i3
315bp
 etoposide-induced_protein_2.4_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
12970 O_BomoMSG21674_complete:A_BomoMSG_c26967_g3_i3
115bp
12971 O_BomoMSG21675_5prime_partial:A_BomoMSG_c26967_g3_i4
116bp
12972 O_BomoMSG21676_complete:A_BomoMSG_c26967_g3_i5
315bp
 etoposide-induced_protein_2.4_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030308 P negative regulation of cell growth
GO:0031965 C nuclear membrane
12973 O_BomoMSG21677_complete:A_BomoMSG_c26967_g3_i5
115bp
12974 O_BomoMSG21678_internal:A_BomoMSG_c26968_g1_i1
158bp
 mitoferrin_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005381 F iron ion transmembrane transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006839 P mitochondrial transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031966 C mitochondrial membrane
GO:0034755 P iron ion transmembrane transport
GO:0048250 P iron import into the mitochondrion
GO:0048515 P spermatid differentiation
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
GO:0060586 P multicellular organismal iron ion homeostasis
12975 O_BomoMSG21679_3prime_partial:A_BomoMSG_c26968_g1_i1
105bp
12976 O_BomoMSG2167_internal:A_BomoMSG_c10255_g1_i1
148bp
 gastrula_zinc_finger_protein_XlCGF57.1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
12977 O_BomoMSG21680_complete:A_BomoMSG_c26968_g1_i2
336bp
 mitoferrin_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005381 F iron ion transmembrane transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006839 P mitochondrial transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031966 C mitochondrial membrane
GO:0034755 P iron ion transmembrane transport
GO:0048250 P iron import into the mitochondrion
GO:0048515 P spermatid differentiation
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
GO:0060586 P multicellular organismal iron ion homeostasis
12978 O_BomoMSG21681_complete:A_BomoMSG_c26968_g1_i2
122bp
12979 O_BomoMSG21682_complete:A_BomoMSG_c26968_g1_i2
109bp
12980 O_BomoMSG21683_complete:A_BomoMSG_c26968_g1_i2
107bp
12981 O_BomoMSG21684_complete:A_BomoMSG_c26968_g1_i2
104bp
12982 O_BomoMSG21685_3prime_partial:A_BomoMSG_c26969_g1_i2
584bp
 cell_division_cycle_protein_23_homolog_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0016567 P protein ubiquitination
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
12983 O_BomoMSG21686_internal:A_BomoMSG_c26969_g1_i3
467bp
 cell_division_cycle_protein_23_homolog_isoform_X1_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0016567 P protein ubiquitination
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
12984 O_BomoMSG21687_complete:A_BomoMSG_c26970_g1_i1
304bp
 serine/threonine_protein_phosphatase_6_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000278 P mitotic cell cycle
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
12985 O_BomoMSG21688_3prime_partial:A_BomoMSG_c26971_g1_i1
539bp
 uncharacterized_protein_LOC101743552_[Bombyx_mori]
12986 O_BomoMSG21689_5prime_partial:A_BomoMSG_c26971_g1_i1
100bp
12987 O_BomoMSG2168_complete:A_BomoMSG_c10256_g1_i1
479bp
 LOW_QUALITY_PROTEIN:_NADH_dehydrogenase_[ubiquinone]_flavoprotein_1,_mitochondrial-like_[Bombyx_mori]
GO:0003954 F NADH dehydrogenase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009060 P aerobic respiration
GO:0010181 F FMN binding
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
12988 O_BomoMSG21690_3prime_partial:A_BomoMSG_c26971_g1_i2
192bp
 uncharacterized_protein_LOC101743552_[Bombyx_mori]
12989 O_BomoMSG21691_5prime_partial:A_BomoMSG_c26971_g1_i2
100bp
12990 O_BomoMSG21692_complete:A_BomoMSG_c26972_g1_i1
2891bp
 protein_lava_lamp-like_[Helicoverpa_armigera]
GO:0000137 C Golgi cis cisterna
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005875 C microtubule associated complex
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0030507 F spectrin binding
GO:0048812 P neuron projection morphogenesis
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0051683 P establishment of Golgi localization
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