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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12991 O_BomoMSG21693_complete:A_BomoMSG_c26972_g1_i1
138bp
12992 O_BomoMSG21694_complete:A_BomoMSG_c26972_g1_i1
104bp
12993 O_BomoMSG21695_complete:A_BomoMSG_c26972_g1_i1
103bp
12994 O_BomoMSG21696_5prime_partial:A_BomoMSG_c26973_g1_i1
358bp
 methionine_aminopeptidase_1_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070527 P platelet aggregation
12995 O_BomoMSG21697_5prime_partial:A_BomoMSG_c26973_g1_i3
389bp
 methionine_aminopeptidase_1_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
12996 O_BomoMSG21698_complete:A_BomoMSG_c26974_g1_i3
153bp
 hypothetical_protein_RR46_01242_[Papilio_xuthus]
12997 O_BomoMSG21699_complete:A_BomoMSG_c26974_g1_i7
102bp
 hypothetical_protein_RR46_01242_[Papilio_xuthus]
12998 O_BomoMSG2169_complete:A_BomoMSG_c10256_g1_i1
105bp
12999 O_BomoMSG216_internal:A_BomoMSG_c1014_g1_i1
122bp
 uncharacterized_protein_LOC101742841_isoform_X1_[Bombyx_mori]
13000 O_BomoMSG21700_3prime_partial:A_BomoMSG_c26975_g1_i1
625bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13001 O_BomoMSG21701_complete:A_BomoMSG_c26975_g1_i1
117bp
13002 O_BomoMSG21702_internal:A_BomoMSG_c26975_g2_i1
183bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13003 O_BomoMSG21703_internal:A_BomoMSG_c26975_g1_i2
189bp
 PREDICTED:_unconventional_myosin-VIIa-like_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13004 O_BomoMSG21704_internal:A_BomoMSG_c26975_g2_i2
416bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13005 O_BomoMSG21705_internal:A_BomoMSG_c26975_g1_i3
360bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13006 O_BomoMSG21706_internal:A_BomoMSG_c26975_g1_i4
292bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13007 O_BomoMSG21707_internal:A_BomoMSG_c26975_g1_i5
550bp
 unconventional_myosin-XV_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
13008 O_BomoMSG21708_complete:A_BomoMSG_c26976_g1_i1
193bp
 PCNA-associated_factor_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0019985 P translesion synthesis
GO:0048471 C perinuclear region of cytoplasm
GO:0051297 P centrosome cycle
GO:0051726 P regulation of cell cycle
13009 O_BomoMSG21709_5prime_partial:A_BomoMSG_c26977_g1_i1
192bp
 zinc_finger_protein_394_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0046872 F metal ion binding
GO:0060041 P retina development in camera-type eye
13010 O_BomoMSG2170_complete:A_BomoMSG_c10258_g1_i1
131bp
 uncharacterized_protein_LOC101744608_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006091 P generation of precursor metabolites and energy
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
13011 O_BomoMSG21710_3prime_partial:A_BomoMSG_c26977_g1_i1
104bp
13012 O_BomoMSG21711_5prime_partial:A_BomoMSG_c26977_g1_i2
672bp
 zinc_finger_protein_394_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13013 O_BomoMSG21712_complete:A_BomoMSG_c26977_g1_i2
146bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_zinc_finger_protein_585A-like,_partial_[Cuculus_canorus]
13014 O_BomoMSG21713_5prime_partial:A_BomoMSG_c26977_g1_i3
403bp
 zinc_finger_protein_394_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13015 O_BomoMSG21714_complete:A_BomoMSG_c26977_g1_i3
146bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_zinc_finger_protein_585A-like,_partial_[Cuculus_canorus]
13016 O_BomoMSG21715_5prime_partial:A_BomoMSG_c26977_g1_i4
212bp
 zinc_finger_protein_394_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
13017 O_BomoMSG21716_5prime_partial:A_BomoMSG_c26977_g1_i4
182bp
 PREDICTED:_zinc_finger_protein_771_isoform_X3_[Jaculus_jaculus]
13018 O_BomoMSG21717_3prime_partial:A_BomoMSG_c26977_g1_i4
124bp
13019 O_BomoMSG21718_5prime_partial:A_BomoMSG_c26978_g1_i1
1103bp
 LOW_QUALITY_PROTEIN:_low-density_lipoprotein_receptor-related_protein_2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
13020 O_BomoMSG21719_complete:A_BomoMSG_c26978_g1_i1
257bp
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