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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12841 O_BomoMSG21558_complete:A_BomoMSG_c26941_g1_i1
110bp
12842 O_BomoMSG21559_complete:A_BomoMSG_c26941_g1_i2
113bp
12843 O_BomoMSG2155_internal:A_BomoMSG_c10227_g1_i1
137bp
 uncharacterized_protein_LOC101737300_[Bombyx_mori]
12844 O_BomoMSG21560_internal:A_BomoMSG_c26942_g1_i1
291bp
 DNA_polymerase_iota_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
12845 O_BomoMSG21561_3prime_partial:A_BomoMSG_c26942_g1_i2
596bp
 DNA_polymerase_iota_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0071494 P cellular response to UV-C
GO:0071897 P DNA biosynthetic process
12846 O_BomoMSG21562_3prime_partial:A_BomoMSG_c26943_g1_i1
757bp
 LOW_QUALITY_PROTEIN:_N-alpha-acetyltransferase_15,_NatA_auxiliary_subunit_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006474 P N-terminal protein amino acid acetylation
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016407 F acetyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0030154 P cell differentiation
GO:0031415 C NatA complex
GO:0043022 F ribosome binding
GO:0043066 P negative regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050821 P protein stabilization
12847 O_BomoMSG21563_complete:A_BomoMSG_c26943_g1_i1
113bp
12848 O_BomoMSG21564_3prime_partial:A_BomoMSG_c26943_g1_i2
421bp
 LOW_QUALITY_PROTEIN:_N-alpha-acetyltransferase_15,_NatA_auxiliary_subunit_[Bombyx_mori]
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006474 P N-terminal protein amino acid acetylation
GO:0016407 F acetyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031415 C NatA complex
GO:0043022 F ribosome binding
GO:0043066 P negative regulation of apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
12849 O_BomoMSG21565_complete:A_BomoMSG_c26943_g1_i2
113bp
12850 O_BomoMSG21566_internal:A_BomoMSG_c26944_g1_i1
125bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
12851 O_BomoMSG21567_3prime_partial:A_BomoMSG_c26944_g1_i2
604bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
12852 O_BomoMSG21568_internal:A_BomoMSG_c26944_g1_i3
120bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
12853 O_BomoMSG21569_3prime_partial:A_BomoMSG_c26944_g1_i4
529bp
 uncharacterized_protein_LOC101741471_[Bombyx_mori]
12854 O_BomoMSG2156_5prime_partial:A_BomoMSG_c10228_g1_i1
137bp
 arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0060271 P cilium assembly
12855 O_BomoMSG21570_5prime_partial:A_BomoMSG_c26945_g1_i1
211bp
 tetratricopeptide_repeat_protein_37_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
12856 O_BomoMSG21571_internal:A_BomoMSG_c26945_g2_i1
663bp
 tetratricopeptide_repeat_protein_37_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
12857 O_BomoMSG21572_5prime_partial:A_BomoMSG_c26945_g1_i2
416bp
 tetratricopeptide_repeat_protein_37_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
12858 O_BomoMSG21573_internal:A_BomoMSG_c26945_g2_i2
343bp
 tetratricopeptide_repeat_protein_37_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
12859 O_BomoMSG21574_5prime_partial:A_BomoMSG_c26945_g1_i3
227bp
 tetratricopeptide_repeat_protein_37_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035327 C euchromatin
GO:0055087 C Ski complex
12860 O_BomoMSG21575_internal:A_BomoMSG_c26946_g1_i1
711bp
 DEP_domain-containing_protein_5_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
12861 O_BomoMSG21576_internal:A_BomoMSG_c26946_g1_i2
1004bp
 DEP_domain-containing_protein_5_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
12862 O_BomoMSG21577_internal:A_BomoMSG_c26946_g1_i3
1028bp
 DEP_domain-containing_protein_5_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0032007 P negative regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0034198 P cellular response to amino acid starvation
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:1990130 C GATOR1 complex
12863 O_BomoMSG21578_5prime_partial:A_BomoMSG_c26947_g1_i1
1232bp
 transcription_initiation_factor_TFIID_subunit_1_isoform_X6_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
12864 O_BomoMSG21579_complete:A_BomoMSG_c26947_g1_i1
108bp
12865 O_BomoMSG2157_internal:A_BomoMSG_c10234_g1_i1
221bp
 peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0004504 F peptidylglycine monooxygenase activity
GO:0004598 F peptidylamidoglycolate lyase activity
GO:0005507 F copper ion binding
GO:0006518 P peptide metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0016829 F lyase activity
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
12866 O_BomoMSG21580_complete:A_BomoMSG_c26947_g1_i1
105bp
12867 O_BomoMSG21581_complete:A_BomoMSG_c26947_g1_i3
539bp
 transcription_initiation_factor_TFIID_subunit_1_isoform_X3_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
12868 O_BomoMSG21582_5prime_partial:A_BomoMSG_c26947_g1_i4
1227bp
 transcription_initiation_factor_TFIID_subunit_1_isoform_X6_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
12869 O_BomoMSG21583_complete:A_BomoMSG_c26947_g1_i4
108bp
12870 O_BomoMSG21584_complete:A_BomoMSG_c26947_g1_i4
105bp
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