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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12811 O_BomoMSG21530_complete:A_BomoMSG_c26936_g1_i3
100bp
 Uncharacterised_protein_[Yersinia_enterocolitica]
12812 O_BomoMSG21531_complete:A_BomoMSG_c26936_g1_i4
1001bp
 sarco/endoplasmic_reticulum_calcium_ATPase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016529 C sarcoplasmic reticulum
GO:0016787 F hydrolase activity
GO:0033017 C sarcoplasmic reticulum membrane
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
12813 O_BomoMSG21532_complete:A_BomoMSG_c26936_g1_i4
167bp
 hypothetical_protein_ALC60_04838_[Trachymyrmex_zeteki]
12814 O_BomoMSG21533_complete:A_BomoMSG_c26936_g1_i4
159bp
 hypothetical_protein_AX774_g7490_[Zancudomyces_culisetae]
12815 O_BomoMSG21534_complete:A_BomoMSG_c26936_g1_i4
107bp
 FI14824p_[Drosophila_melanogaster]
12816 O_BomoMSG21535_complete:A_BomoMSG_c26936_g1_i4
100bp
 Uncharacterised_protein_[Yersinia_enterocolitica]
12817 O_BomoMSG21536_3prime_partial:A_BomoMSG_c26937_g1_i1
102bp
 uncharacterized_protein_LOC101746576_isoform_X2_[Bombyx_mori]
12818 O_BomoMSG21537_5prime_partial:A_BomoMSG_c26937_g2_i1
176bp
 uncharacterized_protein_LOC101746576_isoform_X3_[Bombyx_mori]
12819 O_BomoMSG21538_5prime_partial:A_BomoMSG_c26937_g2_i3
310bp
 uncharacterized_protein_LOC101746576_isoform_X3_[Bombyx_mori]
12820 O_BomoMSG21539_5prime_partial:A_BomoMSG_c26937_g2_i4
199bp
 uncharacterized_protein_LOC101746576_isoform_X3_[Bombyx_mori]
12821 O_BomoMSG2153_internal:A_BomoMSG_c10226_g1_i1
123bp
12822 O_BomoMSG21540_5prime_partial:A_BomoMSG_c26937_g2_i5
192bp
 uncharacterized_protein_LOC101746576_isoform_X3_[Bombyx_mori]
12823 O_BomoMSG21541_complete:A_BomoMSG_c26938_g1_i1
360bp
 protein_KBP_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0006839 P mitochondrial transport
GO:0007399 P nervous system development
GO:0019894 F kinesin binding
12824 O_BomoMSG21542_complete:A_BomoMSG_c26938_g1_i1
175bp
 protein_KBP_homolog_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0006839 P mitochondrial transport
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0019894 F kinesin binding
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030154 P cell differentiation
GO:0048484 P enteric nervous system development
GO:0048929 P efferent axon development in posterior lateral line nerve
GO:1990535 P neuron projection maintenance
12825 O_BomoMSG21543_complete:A_BomoMSG_c26938_g1_i2
175bp
 protein_KBP_homolog_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0006839 P mitochondrial transport
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0019894 F kinesin binding
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030154 P cell differentiation
GO:0048484 P enteric nervous system development
GO:0048929 P efferent axon development in posterior lateral line nerve
GO:1990535 P neuron projection maintenance
12826 O_BomoMSG21544_5prime_partial:A_BomoMSG_c26938_g1_i4
211bp
 protein_KBP_homolog_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0006839 P mitochondrial transport
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0019894 F kinesin binding
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030154 P cell differentiation
GO:0048484 P enteric nervous system development
GO:0048929 P efferent axon development in posterior lateral line nerve
GO:1990535 P neuron projection maintenance
12827 O_BomoMSG21545_complete:A_BomoMSG_c26939_g1_i3
130bp
12828 O_BomoMSG21546_complete:A_BomoMSG_c26939_g1_i6
130bp
12829 O_BomoMSG21547_5prime_partial:A_BomoMSG_c26940_g1_i1
213bp
 pyruvate_carboxylase,_mitochondrial_isoform_X8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
12830 O_BomoMSG21548_3prime_partial:A_BomoMSG_c26940_g1_i1
122bp
12831 O_BomoMSG21549_5prime_partial:A_BomoMSG_c26940_g1_i3
990bp
 pyruvate_carboxylase,_mitochondrial_isoform_X6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
12832 O_BomoMSG2154_5prime_partial:A_BomoMSG_c10226_g1_i1
116bp
12833 O_BomoMSG21550_complete:A_BomoMSG_c26940_g1_i3
196bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
12834 O_BomoMSG21551_5prime_partial:A_BomoMSG_c26940_g1_i3
124bp
12835 O_BomoMSG21552_5prime_partial:A_BomoMSG_c26940_g1_i4
995bp
 pyruvate_carboxylase,_mitochondrial_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
12836 O_BomoMSG21553_complete:A_BomoMSG_c26940_g1_i4
196bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
12837 O_BomoMSG21554_5prime_partial:A_BomoMSG_c26940_g1_i4
124bp
12838 O_BomoMSG21555_complete:A_BomoMSG_c26941_g1_i1
370bp
 LOW_QUALITY_PROTEIN:_transcription_factor_SOX-14_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0001654 P eye development
GO:0001714 P endodermal cell fate specification
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007050 P regulation of cell cycle
GO:0007275 P multicellular organism development
GO:0009611 P response to wounding
GO:0010468 P regulation of gene expression
GO:0016360 P sensory organ precursor cell fate determination
GO:0021983 P pituitary gland development
GO:0030900 P forebrain development
GO:0035019 P somatic stem cell population maintenance
GO:0035198 F miRNA binding
GO:0043281 P regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043410 P positive regulation of MAPK cascade
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045665 P negative regulation of neuron differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048839 P inner ear development
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0070848 P response to growth factor
GO:0090090 P negative regulation of canonical Wnt signaling pathway
12839 O_BomoMSG21556_complete:A_BomoMSG_c26941_g1_i1
131bp
12840 O_BomoMSG21557_complete:A_BomoMSG_c26941_g1_i1
121bp
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