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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12661 O_BomoMSG21396_5prime_partial:A_BomoMSG_c26905_g1_i3
407bp
 splicing_factor_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
12662 O_BomoMSG21397_5prime_partial:A_BomoMSG_c26906_g1_i1
101bp
12663 O_BomoMSG21398_complete:A_BomoMSG_c26906_g1_i2
549bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12664 O_BomoMSG21399_complete:A_BomoMSG_c26906_g1_i3
549bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12665 O_BomoMSG2139_internal:A_BomoMSG_c10175_g1_i1
331bp
 eIF-2-alpha_kinase_GCN2_isoform_X2_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0002250 P adaptive immune response
GO:0002286 P T cell activation involved in immune response
GO:0002376 P immune system process
GO:0002821 P positive regulation of adaptive immune response
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007399 P nervous system development
GO:0007612 P learning
GO:0007616 P long-term memory
GO:0009267 P cellular response to starvation
GO:0010628 P positive regulation of gene expression
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
GO:0019081 P viral translation
GO:0022626 C cytosolic ribosome
GO:0030154 P cell differentiation
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0032792 P negative regulation of CREB transcription factor activity
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0034976 P response to endoplasmic reticulum stress
GO:0036492 P eiF2alpha phosphorylation in response to endoplasmic reticulum stress
GO:0039520 P induction by virus of host autophagy
GO:0043558 P regulation of translational initiation in response to stress
GO:0044828 P negative regulation by host of viral genome replication
GO:0045665 P negative regulation of neuron differentiation
GO:0045947 P negative regulation of translational initiation
GO:0046777 P protein autophosphorylation
GO:0051607 P defense response to virus
GO:0060259 P regulation of feeding behavior
GO:0060733 P GCN2-mediated signaling
GO:0070417 P cellular response to cold
GO:0071074 F eukaryotic initiation factor eIF2 binding
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:1900273 P positive regulation of long-term synaptic potentiation
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
12666 O_BomoMSG213_internal:A_BomoMSG_c956_g1_i1
124bp
 phospholipase_D2_isoform_X3_[Bombyx_mori]
GO:0002031 P G protein-coupled receptor internalization
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031526 C brush border membrane
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0048017 P inositol lipid-mediated signaling
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
12667 O_BomoMSG21400_5prime_partial:A_BomoMSG_c26907_g1_i1
700bp
 LOW_QUALITY_PROTEIN:_nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
12668 O_BomoMSG21401_3prime_partial:A_BomoMSG_c26907_g1_i1
148bp
12669 O_BomoMSG21402_complete:A_BomoMSG_c26907_g1_i2
310bp
 LOW_QUALITY_PROTEIN:_nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
12670 O_BomoMSG21403_complete:A_BomoMSG_c26908_g1_i1
901bp
 putative_sodium-coupled_neutral_amino_acid_transporter_10_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006865 P amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12671 O_BomoMSG21404_complete:A_BomoMSG_c26908_g1_i1
162bp
12672 O_BomoMSG21405_complete:A_BomoMSG_c26908_g1_i1
101bp
12673 O_BomoMSG21406_3prime_partial:A_BomoMSG_c26908_g1_i2
308bp
 CTP_synthase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003883 F CTP synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006241 P CTP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0035167 P larval lymph gland hemopoiesis
GO:0044210 P 'de novo' CTP biosynthetic process
GO:0097268 C cytoophidium
12674 O_BomoMSG21407_complete:A_BomoMSG_c26908_g1_i3
901bp
 putative_sodium-coupled_neutral_amino_acid_transporter_10_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006865 P amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12675 O_BomoMSG21408_complete:A_BomoMSG_c26908_g1_i3
162bp
12676 O_BomoMSG21409_complete:A_BomoMSG_c26908_g1_i3
101bp
12677 O_BomoMSG2140_5prime_partial:A_BomoMSG_c10175_g1_i1
185bp
12678 O_BomoMSG21410_5prime_partial:A_BomoMSG_c26909_g1_i1
337bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
12679 O_BomoMSG21411_complete:A_BomoMSG_c26909_g1_i1
161bp
12680 O_BomoMSG21412_complete:A_BomoMSG_c26909_g1_i2
390bp
 arginine/serine-rich_protein_PNISR_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
12681 O_BomoMSG21413_complete:A_BomoMSG_c26909_g1_i2
161bp
12682 O_BomoMSG21414_complete:A_BomoMSG_c26909_g1_i3
408bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
12683 O_BomoMSG21415_complete:A_BomoMSG_c26909_g1_i3
161bp
12684 O_BomoMSG21416_5prime_partial:A_BomoMSG_c26909_g1_i4
392bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
12685 O_BomoMSG21417_complete:A_BomoMSG_c26909_g1_i4
161bp
12686 O_BomoMSG21418_5prime_partial:A_BomoMSG_c26910_g1_i1
505bp
 plexin_A3_[Bombyx_mori]
GO:0002116 C semaphorin receptor complex
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0021602 P cranial nerve morphogenesis
GO:0021610 P facial nerve morphogenesis
GO:0021612 P facial nerve structural organization
GO:0021615 P glossopharyngeal nerve morphogenesis
GO:0021636 P trigeminal nerve morphogenesis
GO:0021637 P trigeminal nerve structural organization
GO:0021644 P vagus nerve morphogenesis
GO:0021784 P postganglionic parasympathetic fiber development
GO:0021785 P branchiomotor neuron axon guidance
GO:0021793 P chemorepulsion of branchiomotor axon
GO:0021960 P anterior commissure morphogenesis
GO:0030334 P regulation of cell migration
GO:0048485 P sympathetic nervous system development
GO:0048812 P neuron projection morphogenesis
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0050923 P regulation of negative chemotaxis
GO:0071526 P semaphorin-plexin signaling pathway
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
12687 O_BomoMSG21419_5prime_partial:A_BomoMSG_c26911_g1_i1
144bp
 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
12688 O_BomoMSG2141_complete:A_BomoMSG_c10182_g1_i1
423bp
 uncharacterized_protein_LOC101745471_isoform_X1_[Bombyx_mori]
12689 O_BomoMSG21420_3prime_partial:A_BomoMSG_c26911_g1_i1
143bp
12690 O_BomoMSG21421_5prime_partial:A_BomoMSG_c26911_g1_i1
112bp
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